| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2596 |
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| Symbol | |
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| ID | 4269229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2940433 |
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| End bp | 2942442 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638127355 |
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| Product | dehydrogenase, E1 component |
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| Protein accession | YP_743426 |
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| Protein GI | 114321743 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.817741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000871115 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACTG ACAGCGAAGG CAAGCCGAGG CTGTCGCGCA CGCACCTGCT GGCCCTGCTC
CGTCAGATGC TGCGCATGCG CCGGTTCGAG GAGCGCTGCG TCGAACTCTA CACCCAGGAG
AAGATCCGTG GCTTCCTCCA CGTCTACATC GGCGAGGAGG CGGTCGGGGC CGGCGCCATG
TTCGGTCTCG ACCCGAACGA CGGCGTGGTG GCCACCTACC GCGAGCACGG CCACGCCCTG
CTCAATCGCA TCGCCATGAA CCCGGTGATG GCGGAGATGT ACGGCAAGGC GGCCGGATGC
AGCCTGGGGC GGGGCGGGTC GATGCACCTG TTCGACGCCG AACACCGATT TTACGGCGGC
AACGCCATTG TCGGCGGCGG CTTGCCGTTG GCCGTGGGGC TGGCGCTGGC CGACAAGCTG
GCGGGTCGCC AGCGGGTGAC CGCCTGTTTC TTCGGCGACG GCGCCGTGGC CGAGGGGGTG
TTCCACGAGT CGCTCAACCT GGCCGCCCTC TGGCAGCTCC CGGTCTTTTT CGTCTGCGAG
AACAACCAGT ACGCCATGGG GACGGCCCTG CACCTCGCCC ACGCCCAGAC CGAGCTGTAC
CGCAAGGCGG AGGCCCTGGG CGTCCCCGCC GAGCGGGTGG ACGGCATGGA TGTGGTGGCG
GTGGAGGCCG CCAGCGGCCG GGCCCTGGCC TCCGTGCGTG CCGGCGAGGG GCCGCGCTTC
CTGGAGTGCG AGACCTACCG CTTCCGGGCC CACTCCATGT TCGACCCGCA GCTCTACCGT
GACAAGGCGG AGGTGGAGGC GTGGCAGGCC CGCGACCCGA TCCGGCGGCT CAGTGATTGG
ATGAGCCGCT CCGGGGCGCT GCACGAGGGG GAGTTGGAGG CCATGGACGG GGAAATCGGT
GAGGAGATTG ACGCCGCCGT GGCCTTCGCC GAGCAGGCCG AATGGGAGTC CCCGGATACC
CTGCTGGATC ACGTCTGCGC ACCGGTGTCG GAGGCGCCCC CTCCGCCCCC CGATGTGGCG
ACCGAGCCGG AGCGGCTGAG CTTCCGCGAG GCCTTCCGGC GTGGCTTGAT CGAGGCCCTG
ACCCATGAGC CGCGCAGCTT CATGATGGGG GAGGACATCG GTCACTACGG GGGCTGCTAC
GCCGTCTCCC GCGGGTTGCT GGAGCAGTTT GGGCCGGAGC GGATGCGCGA CACCCCGCTC
TCGGAGAACG GCTTCACCGG CGCCGGGGTC GGCGCGGCCC TGGGCGGCGC CCGGCCCATC
GTCGAGATCA TGACGGTGAA CTTCAGCCTG CTGGCGCTGG ACCAGATCGT CAATAACGCC
GCCACGCTGC TGCACATGTC CGGCGGCCAG TTCCCCGTCC CCCTGGTGAT CCGCATGGCC
ACCGGCGCCG GCCGGCAGGT GGCTGCCCAG CACTCCCACA GCCTGGAGAA CTGGTACGCC
CACGTGCCCG GGCTCAAGGT GCTGGCGCCG GGCACCCTGG AGGACGCCCG GCACATGCTT
TGGGCGGCGC TGCATGACCC CAACCCGGTG GTGATCTTCG AGCACGTCCT GCTCTACAAC
CAGGAGGGCG AGCTGACCCC CTGCCCGCAG GGGGTGGATA TCCGCCAGGC CGCCATCCGC
CGGCCGGGCC AGCACCTGAC CCTGATCACC TACGGCGGCA GTCTGGGTAA GACCCTGGAG
GCGGCCGAGG CGCTGGCAGA GGAGGGTATC GAGGCCGAAG TGCTGGATCT GCGGGTGTTG
CGCCCGCTGG ATACGGAGGC CCTGGTGGCA TCGGTTACCC GCACCCAGCG GGCGGTGATT
GTGGACGAGG GGTGGAAGAC CGGCAGCCTG GCTGCGGAGA TCAGCGCCAT CCTGGCGGAA
CAGGCCCTGT GGTACCTGGA CGCCCCCATC GCCCGGGTCT GCTCGGCCGA GATCCCGATC
CCCTACGCAC GCCACCTGGA GACGGCAGCC CTGCCCCAGG TGGAGGACAT CGTCGGGGCC
GCCCGACAGG TCATGGAGGG GGCGGAATGA
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| Protein sequence | MTTDSEGKPR LSRTHLLALL RQMLRMRRFE ERCVELYTQE KIRGFLHVYI GEEAVGAGAM
FGLDPNDGVV ATYREHGHAL LNRIAMNPVM AEMYGKAAGC SLGRGGSMHL FDAEHRFYGG
NAIVGGGLPL AVGLALADKL AGRQRVTACF FGDGAVAEGV FHESLNLAAL WQLPVFFVCE
NNQYAMGTAL HLAHAQTELY RKAEALGVPA ERVDGMDVVA VEAASGRALA SVRAGEGPRF
LECETYRFRA HSMFDPQLYR DKAEVEAWQA RDPIRRLSDW MSRSGALHEG ELEAMDGEIG
EEIDAAVAFA EQAEWESPDT LLDHVCAPVS EAPPPPPDVA TEPERLSFRE AFRRGLIEAL
THEPRSFMMG EDIGHYGGCY AVSRGLLEQF GPERMRDTPL SENGFTGAGV GAALGGARPI
VEIMTVNFSL LALDQIVNNA ATLLHMSGGQ FPVPLVIRMA TGAGRQVAAQ HSHSLENWYA
HVPGLKVLAP GTLEDARHML WAALHDPNPV VIFEHVLLYN QEGELTPCPQ GVDIRQAAIR
RPGQHLTLIT YGGSLGKTLE AAEALAEEGI EAEVLDLRVL RPLDTEALVA SVTRTQRAVI
VDEGWKTGSL AAEISAILAE QALWYLDAPI ARVCSAEIPI PYARHLETAA LPQVEDIVGA
ARQVMEGAE
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