| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2185 |
|---|
| Symbol | |
|---|
| ID | 4270964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2484174 |
|---|
| End bp | 2490701 |
|---|
| Gene Length | 6528 bp |
|---|
| Protein Length | 2175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638126941 |
|---|
| Product | excinuclease ABC, A subunit |
|---|
| Protein accession | YP_743017 |
|---|
| Protein GI | 114321334 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.124158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGCG ACTGCATCCG GGTGCGTGGT GCCCGCCAGA ACAACCTGCG GGGCTTCGAC
CTGGACATCC CCTTGGGCGA GCTGGTGGTG ATCACCGGGG TCTCCGGCTC GGGCAAGTCC
TCGCTGGCCT TCGACACCGT CTATGCCGAG GGTCAGCGCC GCTACGTGGA GACCTTCTCC
CCCTACGCCC GGCAGTTCCT GGACCGCATG GACCGCCCGG CGGTGGACCG CATCGACGGC
GTGCTGCCCG CCATCGCCAT CGACCAGACC AACCCGGTGC GCACCTCCCG CTCCACCGTG
GGCACCATGA CCGAGCTGAA CGACCACCTG AAGCTGCTCT TCGCCCGCAC CGCCCAGCTC
TACTGCGGCG GCTGCGGCAA GCGCGTCCAG CGCGACACCG CCGAGGGGGT GGCGGCCCGC
CTGCTGGCTG GCCACGCCGG CGAGCGCGCG ATGGTCACCG CCCGGGTCGC CATCCCCAAA
AAATCCAGCG CCGACACCCT GCGTGAGCTG CTCGCCGGTC AGGGTTACAC CCGCATCCAC
GGCGAGGACC GCACCCACCT GGAGGTGGTG ACCGACCGCA TCCGGCTGGT GCCGGACCGC
CGCGACCGCC TGGTGGAGGC CCTGGAGTCG GGCCTGAAGC TGGGCCGGGG CCACATCCAG
GTGCGCCTGC TGGATGAAAA CCGCGAACCC GGCAAGCCCC TGCGCTACTC CGCCGACCTG
CACTGCGCCG ACTGCGACAT CCACTACGAC GACCCCACCC CCGGGCTCTT CTCCTTCAAC
TCCCCGGTGG GCGCCTGTGA GACCTGCCGC GGCTTCGGCC GGGTGATGGG CATCGACTAC
CGCCTCGTCA TCCCGGATGA CGCCCTCAGC CTCGAAGCCG GCGCCATCAA GCCCTTCCAG
TCCGGCCGCT CCGCCGAGTG CCAGGACGAC CTGCTGTTCC ACGCCCGCCG CCGGGGCGTG
GCCACCGACA TCCCCTTCCG CGACCTGCCG GAGGCCGACC GGCAATGGAT CATCCAGGGG
GAAGGCAAAT TCAACGGCCG CAAGTGGTAC GGCGTCGATG GTTACTTCCA GTATCTGGAG
CGCAAGAGCT ACAAGATGCA CGTGCGCGTG CTACTCAGCC GCTACCGCAG CTACGACCCC
TGCCCCGACT GCCACGGCGC CCGCCTCAAG CCCGGCGCCC TGCTCTGGCG CATCGGCAAC
CACGAAGACA GCGACGCCGT CATCGACCGC GCCGAGCGCC ACCGCCCCCA CGGCGCCACC
CTGCCCGAAC ACGCCCTCCA CGGCCTGCCC GGCCTGCACC TGCACGACGT CCTCACCCTG
CCGCTGGACC GCTGCGCCCG CTTCTTCCAG GACATCCACC TGCCCGCCCC GCTGGACGAG
GCGGCGGAGA TCCTGCTGGA GGGCATCCGC AACCGCCTCA CCTACCTCAA CACCGTCGGC
CTGGGCTACC TCACCCTCGA CCGCCAGTCC CGCACCCTCT CCGGCGGCGA AGTCCAGCGC
ATCAACCTCA CCACCGCCCT GGGCACGGCC CTGGTCAACA CCCTCTTCGT CCTAGACGAG
CCCTCCATCG GCCTCCACCC GCGGGACATC GACCGCATCG TCACCGTCAT GCACCGCTTA
CGCGACGCCG GCAACTCCCT GCTCGTGGTG GAACACGACC CGGCCGTGAT GCAGGCGGCC
GACCGCCTCA TCGACATCGG CCCCGGCCCC GGCGAACGCG GCGGCCAGAT CACCTTCAAC
GGCACCCCCG CCGAACTGCT ACGCACCGAA AACTCCCTCA CCGCCGACTA CCTCACCGGC
CGAAGACAGG TGGTGCCGAC AAATGCACGC CCTGATCGCT ATGGCCACAA CGACGCAGAC
GCTGGGCCTG GCGAGTCCGG CGAGTCCGGC GAGTCCGGCG AGTCCGGCGA GTCCGGCGAG
TCCGGCGAGT CCGGCGAGTC CGGCGAGTCC GGCGAGTCCG GCGAGTCCGG CAGCCGAGTT
TGTAACAAAG CAGGGACACG ACTCCAGGAG CGCAAGGCCG AGGGCAACGC GCCTGCCGAG
AGCGGTTCGT GTTCCGGGCG GAACCGTAAA GACGCGTGGG GGGAAGGCGG AGCCCCGAAC
CCCGCAGGGC CTGGCGGTGA TGGCGGGTGG GTTCGTAGCG GAGCGCGGGC GCAGGGCGGA
GAAGGCCCGA AGGGTGGCCG CAGGGATGCG GCCACCGGCC GTCAGGCCAT GGATGGCCTG
TCGGCCGGCC CCGCCCGGAG CCCGGAGAAG CGGAGCTCCG AACCCACCCG CCATCACCGC
CAGGCCCCCG ACTCCGAGCC AAATAACGGC TCCAGCCAAG CCGTGACCCC GCTACCGCCT
GACACCCCCA AGGTCACGAT CCAGGGCGCA ACCGAACACA ACCTCCAGCA CCTGACCGTG
GAAATCCCCG TCCACCCCGC CCTAGTCTGC CTCACCGGCG TCTCCGGCTC CGGCAAATCC
ACCCTCATGC GCGACATCCT CCACAACGAA CTCGCCCGCC GCAAAGGCCA CCCCGGCGAC
CCACCCGGCG CCTTCCAAAC CCTCACCGGC GACGAACACA TCGACAACGT GGTGCTGGTC
GACCAATCCC CCATCGGCAA GACCACCCGC TCCAACCCCG CCAGCTACAC CGGCGCCTTC
GAACCCATCC GCAAGGCCTA CGCCGCCGAA CCCCTCGCCC GGGAACGCCA ATACACCCCC
GGCGTCTTCA GCTTCAACTC CGGCAAGGGC CGCTGCCCCA CCTGCGGCGG CAACGGCTTC
GAACACGTGG AGATGCAATT CCTCTCCGAC GTCTACCTGC GCTGCCCCGA CTGCAACGGC
AGCCGGTACC GCCCGGAAAT CCTCGAGATC CAGCGCCTGC CCGACCCCGG GGCCGACCTG
GGCACCGCCG GCGACGGCCC CAGGCACATC GCCGAAATCC TGGACCTGAC CGTGGACCAG
GCCACCGAGT TCTTCCGCAC CACCCCGGCC GTGCTGCGCA GCCTGGAACC GCTGCAGGCC
GTGGGCCTGG GCTACCTGAA ACTGGGCCAG CCGGTCCCCA CCCTGTCCGG GGGCGAGGCC
CAGCGGCTGA AACTGGCCGG GCACCTGGCC AAGACCAGCG GCCGGCGCAA GCAACAACAA
CGGCTGCTGT TCCTGTTTGA CGAACCCACC ACTGGGCTGC ACTTCCACGA CGTGGCCGTG
CTGCTCAGCG CCTTCCGGCG GCTGCAGGAC GAGGGCCACG CGCTGCTGGT CATCGAACAC
AACCTGGACG TGATGCGGGC GGCGGACTGG ATCATCGACC TGGGGCCGGA GGGGGGCGAC
CGGGGCGGCC GGCTGGTCTG CACCGGCACA CCGGAACAGA TCATGGCGCA AAGCGACCTC
TCCCACACCG GGCGGGCGCT GGCCGAGTAC ACCGGGGCAC TAGAGCGCCT CCGTACGACA
GCGGAGGCTT CGGAGGGGGC GGCTTCGGGC GAACCCGGGC CGGGGATGTC CGGCAGGGGG
ACGCAGCACT ACATCGACAT CCACCACGCC CGCGAGCACA ACCTTAAGGG CGTGGACATC
CGCATCCCGC GCAACCGGCT CACGGTCATC ACCGGCCTGT CCGGCTCCGG CAAGTCCACC
GTCGCCTTCG ACATCCTCTT CAACGAAGGC CAGCGCCGCT ACCTGGAGTC ACTCAACGCC
TACGCCCGCC AGTTCGTGCA ACCGGCGGCG CGCCCCGACG TGGACAGCGT CGAGGGCATC
CCGCCCACCG TCGCCATCGA ACAGCGCACC AGCCGCGGCG GGCGCAAGAG CACCGTCGCC
ACCCTGACCG AGCTGCACCA CTTCCTGCGC CTGCTCTACG CCCGCCTCGG CACCTGGCAC
TGCCCCGCCT GCCAGGTGCC CATCCAGGCC CAGACCCCCG AGGCCATCCA CGCCCAGCTT
CTGCGCGAGC ACCGCGGCGA GACCCTGCAC CTGCTGGCCC CCATGGTCAG CGGCCGCAAG
GGCATCTACA AGGAACTGGC CCGCTGGGCC GCGGGCAAGG GCGTCGGGCA CCTCTACGTG
GACGGCGAAT TCCTGCCCAC CGCCGACTGG CCGAAACTCG ACCGCTACCG GGAACACGAC
ATCGACCTGC CCGTGGCCGA ACTGCGCATC GAACCGGAAA ACGCCCAACC CCTGCGCCAG
GCCATCGCCC GGGCCCTGGA ACAAGGCAAA GGCGTCCTGC GCATCCTCAC CGCCGAACGA
ACCCTGCAGA CCCTCTCCAC CGAACGGGCC TGCCCCAGCT GCCAACGCAG CTTCGACGAA
CCCGACCCGC GCCAGTTCTC CTACAACAGC CCCCACGGCT GGTGCCCCAC CTGCTACGGC
ACCGGCGAGG TGTTGGAAGG CTTCAGCGAC GAGGACAGCG GCGAAGAGCG CCACTGGCGG
GAGACCGAAA GCGACGACGA CGCCCTCCCC GCCCCCTGCC CCACCTGCAA CGGCACCCGC
CTCAACGCCG AGGCCCGCGC CGTCACCTTC CAGGGCCGCA CCCTCCCCGA ACTCTCCGCC
CTCACCGTCC GCGAGGCCAG GGCCTGGTTC CGGGTAATGC GCGCCCACTC CCCCCAGCCT
GGACCAAAGG AAATCGAAGT CGATGACCCC GAAGCTGCCG AGCGGGGTGG GGGGCGGAGC
ACGCCGGTGC CTAGCGGAGC GCGGCCCGCT GGCGGATCAG GCCCGAAGGG TGGCCGCAGG
GGTGAGGCGG AAACAGATCG GTGTCCAGTG GACACCGATC CCGCCGAACG GGCGGGCCAC
GGATGGCTCG CCCCGGCCCT GCCAGCAGCG CAGGATAGCG CTGCTGAGCA GGCGGCCACC
GACCGTCAGG CCAGGGATGG CCTGTCGGTC GGCCCCGCCA GCGGGACGGA GAAGCGCAGC
TCGGCACCGG CGCGCTCCGC CCCCCACCCC GCGTCCAACC CCGTCGAAGT CGCACCACCA
AACGCACATG GGCCCGGAAA CGATAATGCA GAACCCTTGG CATTGACGGA CCGCGAGGCC
ACCATCGCCC GCGACGTCCT CCCGGAAATC CACCACCGCC TCCGCTTCCT GGAAGACGTC
GGCCTCGGCT ACCTCAGCCT CGACCGCGCC GCCCCCACCC TCTCCGGCGG CGAAGCCCAA
CGCATCCGCC TCGCCGCCCA ACTGGGCTCA AACCTCCAGG GCGTCTGCTA CGTCATGGAC
GAACCCACCA TCGGCCTCCA CCCCCGCGAC AACCGCCTGC TCCTCGACGT CCTCGCCCGC
CTCGAAGGCA AAGGCAACAC CATCGTCGTC GTCGAACACG ACGAAGACAC CATCCGCCGC
GCCGAACACA TCATCGACCT GGGCCCCGGC GCCGGCATCA ACGGCGGCCG GGTCGTCGCC
GCCGGCACCG TCGAGCAACT GCTGCAACAC CCCCGCTCCA TCACCGGCCG CTACCTCCGC
CACCCCCTGC ACCACCCCCT GCGCGGCCAG CGGCGAACCG TCAGCCTGGC CACCACCCCG
GCAGGGTCCC ACCCGCAACC GACAACGCCG GCCGAGCACG ACGTCCTGAC CCTGCACGCC
CCTACCCTGC ACAACCTCCA GGGCCACGAC CTACACCTGC CCCTGGGCCG CCTCATGGTC
GTGACCGGCG TCTCCGGCTC CGGCAAATCC TCCCTCATCC GCGGCGTCCT CAAACCCGCC
CTGAAACGCC TGCTGAGCCG CAAACGGGAC CAGGCGACCC CACCACTGCC CCACTGCGCC
GGCCTGGATG GCTGGCAGGC CGTCGACCGC GTGCTGGAGG TGGACCAGAC CCCCATTGGC
AAGACCCCGC GCTCCTGCCC CGCCACCTAC ATCGGCTTCT GGGACGACAT CCGCAAGCTC
TACGCCGGCA CCCAGGAGGC CAGCCTGCGC GGCTACGGCC CCGGCCGCTT CTCCTTCAAC
ACCAAAGACG GCCGCTGCCC TGACTGCGAC GGCCAGGGCG TACGCCGGAT CGAGATGAAC
TTCCTGCCCG ACGTCACCGT ACCCTGCGAG ACCTGCCACG GACTGCGCTT CACCCGCGAG
ACCCTGGCCG TGGAATGGAA AGGCCGGCAC ATCGGCGACG TACTCAACAT GAGCGTGGAA
GAGGCCACCG CCTTCTTCGC CGCGCAACCG CGCATCCACC ACCCGCTCAC ACTGCTCGAG
GCCGTCGGCC TGGGCTACCT CACCCTGGGC CAGGCCAGCC CCACCCTCTC CGGGGGCGAG
GCCCAGCGCA TCAAACTGGT CACCGAACTG GCCAAGGCCC GCCCCGACCT GCGCGCCCAG
CGTACCCCCC ACACCCTCTA CGTCCTGGAC GAGCCCACCG TGGGCCTGCA CATGGCAGAC
GTGGAGCGAC TCATCGACGC CCTGCAGCGG CTGGTGGACG CCGGCCACAC CGTGGTGGTC
ATCGAACACA ACCTCGATCT CATCGCCGAG GCGGACTGGG TGGTGGACAT CGGTCCGGAG
GGGGGCGACG CCGGCGGCCG GGTGGTCGCC GCCGGGCCGC CCGAGGCCGT GGCCGCCGGG
TCGACCGCGA CCGGACGCTT CCTGGCGGAG GTGTTGAAGC GGAAGTAA
|
|---|
| Protein sequence | MSRDCIRVRG ARQNNLRGFD LDIPLGELVV ITGVSGSGKS SLAFDTVYAE GQRRYVETFS
PYARQFLDRM DRPAVDRIDG VLPAIAIDQT NPVRTSRSTV GTMTELNDHL KLLFARTAQL
YCGGCGKRVQ RDTAEGVAAR LLAGHAGERA MVTARVAIPK KSSADTLREL LAGQGYTRIH
GEDRTHLEVV TDRIRLVPDR RDRLVEALES GLKLGRGHIQ VRLLDENREP GKPLRYSADL
HCADCDIHYD DPTPGLFSFN SPVGACETCR GFGRVMGIDY RLVIPDDALS LEAGAIKPFQ
SGRSAECQDD LLFHARRRGV ATDIPFRDLP EADRQWIIQG EGKFNGRKWY GVDGYFQYLE
RKSYKMHVRV LLSRYRSYDP CPDCHGARLK PGALLWRIGN HEDSDAVIDR AERHRPHGAT
LPEHALHGLP GLHLHDVLTL PLDRCARFFQ DIHLPAPLDE AAEILLEGIR NRLTYLNTVG
LGYLTLDRQS RTLSGGEVQR INLTTALGTA LVNTLFVLDE PSIGLHPRDI DRIVTVMHRL
RDAGNSLLVV EHDPAVMQAA DRLIDIGPGP GERGGQITFN GTPAELLRTE NSLTADYLTG
RRQVVPTNAR PDRYGHNDAD AGPGESGESG ESGESGESGE SGESGESGES GESGESGSRV
CNKAGTRLQE RKAEGNAPAE SGSCSGRNRK DAWGEGGAPN PAGPGGDGGW VRSGARAQGG
EGPKGGRRDA ATGRQAMDGL SAGPARSPEK RSSEPTRHHR QAPDSEPNNG SSQAVTPLPP
DTPKVTIQGA TEHNLQHLTV EIPVHPALVC LTGVSGSGKS TLMRDILHNE LARRKGHPGD
PPGAFQTLTG DEHIDNVVLV DQSPIGKTTR SNPASYTGAF EPIRKAYAAE PLARERQYTP
GVFSFNSGKG RCPTCGGNGF EHVEMQFLSD VYLRCPDCNG SRYRPEILEI QRLPDPGADL
GTAGDGPRHI AEILDLTVDQ ATEFFRTTPA VLRSLEPLQA VGLGYLKLGQ PVPTLSGGEA
QRLKLAGHLA KTSGRRKQQQ RLLFLFDEPT TGLHFHDVAV LLSAFRRLQD EGHALLVIEH
NLDVMRAADW IIDLGPEGGD RGGRLVCTGT PEQIMAQSDL SHTGRALAEY TGALERLRTT
AEASEGAASG EPGPGMSGRG TQHYIDIHHA REHNLKGVDI RIPRNRLTVI TGLSGSGKST
VAFDILFNEG QRRYLESLNA YARQFVQPAA RPDVDSVEGI PPTVAIEQRT SRGGRKSTVA
TLTELHHFLR LLYARLGTWH CPACQVPIQA QTPEAIHAQL LREHRGETLH LLAPMVSGRK
GIYKELARWA AGKGVGHLYV DGEFLPTADW PKLDRYREHD IDLPVAELRI EPENAQPLRQ
AIARALEQGK GVLRILTAER TLQTLSTERA CPSCQRSFDE PDPRQFSYNS PHGWCPTCYG
TGEVLEGFSD EDSGEERHWR ETESDDDALP APCPTCNGTR LNAEARAVTF QGRTLPELSA
LTVREARAWF RVMRAHSPQP GPKEIEVDDP EAAERGGGRS TPVPSGARPA GGSGPKGGRR
GEAETDRCPV DTDPAERAGH GWLAPALPAA QDSAAEQAAT DRQARDGLSV GPASGTEKRS
SAPARSAPHP ASNPVEVAPP NAHGPGNDNA EPLALTDREA TIARDVLPEI HHRLRFLEDV
GLGYLSLDRA APTLSGGEAQ RIRLAAQLGS NLQGVCYVMD EPTIGLHPRD NRLLLDVLAR
LEGKGNTIVV VEHDEDTIRR AEHIIDLGPG AGINGGRVVA AGTVEQLLQH PRSITGRYLR
HPLHHPLRGQ RRTVSLATTP AGSHPQPTTP AEHDVLTLHA PTLHNLQGHD LHLPLGRLMV
VTGVSGSGKS SLIRGVLKPA LKRLLSRKRD QATPPLPHCA GLDGWQAVDR VLEVDQTPIG
KTPRSCPATY IGFWDDIRKL YAGTQEASLR GYGPGRFSFN TKDGRCPDCD GQGVRRIEMN
FLPDVTVPCE TCHGLRFTRE TLAVEWKGRH IGDVLNMSVE EATAFFAAQP RIHHPLTLLE
AVGLGYLTLG QASPTLSGGE AQRIKLVTEL AKARPDLRAQ RTPHTLYVLD EPTVGLHMAD
VERLIDALQR LVDAGHTVVV IEHNLDLIAE ADWVVDIGPE GGDAGGRVVA AGPPEAVAAG
STATGRFLAE VLKRK
|
|---|
| |