Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2160 |
Symbol | |
ID | 4270155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 2455108 |
End bp | 2456424 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638126916 |
Product | type II secretion system protein E |
Protein accession | YP_742992 |
Protein GI | 114321309 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0397447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0352451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTGG GGATGTACGG CAAGCGCATC GCGCTGCGGC AGAAAGCCGA TGAGCAGAAC CTCAAACTGC GGCTGCACCG GTATCTCATC GACGCCATTG AGGAGGACGG GGTCGACCTA GCCACCTGGG TGCGGCCCGC CATCCTGGAA TACGTCCGCG AGAAGGTGGG CGGGTACGTG GCCAGCCACC GGCTGGCCGT CAGCCGCCAG GACCTGGACC GGCTCGCGGA GGACATCGCC GATGAGCTCT GCGGCCTCGG GCCGCTGCAG ACCCTGCTGG CCGACCCCTC GATCTCCGAG GTGTTGGTGA ACGGTCCCGA GCACATCATC GTGGAGCGCG ACGGCAAGCT GTTCGAGACC GACCACCGAT TCATCGACGA CGACCACGTC AAGCGGGTCA TCGACCGGAT CCTCGCCCCC CTGGGCCGGC GGTTGGACGA GGCCAGCCCG ATGGTCGACG GCCGTCTCCC AGACGGCAGC CGGGTCAACG CGGTGATCCC ACCGGTGGCG CTGGACGGCC CCTGCGTCTC CATCCGCAAG TTCGCCGCGG ACCCCCTGCG GGGCAATGAC CTGATCGCCT ACAAGACGCT GGACGAGGGC CTGTTGGCCT TCCTGCGCAA CGCGGTGGAG CAGCGCGCCA ACATCCTCAT CAGCGGCGGG ACGAGCACCG GGAAGACCAC GCTGCTCAAT GTCATGAGCG GCTATGTGGG TGCGACGGAG CGCATTGTCA CCATTGAGGA CACCGCCGAG TTGCAGCTTC ACCATAGCCA CGTGGTTCGG CTGGAGACCC GGCCGCCCAA CGTCGAGGGC TATGGGGAGA TCACCGCCCG GGACCTGGTC AAGAACGCCC TGCGCATGCG CCCGGACCGC ATCATCCTCG GTGAGGTGCG CGGCGATGAG GTGGTCGAGG TGATGCAGGC AATGAACACC GGCCACGACG GCTCCATGTC CACGGTGCAC GCCAACAACG CCACCGATGC GCTGCTGCGT ATGGAGATGC TGTTCGGCAT GGCGGGGCGG CAGATGTCTG AGGTCACGGT GCGCCGCATG ATCGGCGCCG CCGTAGACCT GATCGTCCAG TTGGTCCGGC TCAGGGACGG AACCCGCTGT ATCAGCGAGG TGCGGGAGCT GGTGACGGTG CGGGACGGTA ACTTCGTCAC CACGGTCCTG TATGAACGGG ACGCGGAGAG CGGACAGTTT GTGCGCAGGG ACGACCCGGT CTCCAACCCG AAGCTTCAGG CCCTCAACGC CCCCGCCCGG CGGGAAGGCC CCCGGGTGGG GACCCGGTGG GCAGCCCCAC GCACCCGGCA TGAGTGA
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Protein sequence | MKVGMYGKRI ALRQKADEQN LKLRLHRYLI DAIEEDGVDL ATWVRPAILE YVREKVGGYV ASHRLAVSRQ DLDRLAEDIA DELCGLGPLQ TLLADPSISE VLVNGPEHII VERDGKLFET DHRFIDDDHV KRVIDRILAP LGRRLDEASP MVDGRLPDGS RVNAVIPPVA LDGPCVSIRK FAADPLRGND LIAYKTLDEG LLAFLRNAVE QRANILISGG TSTGKTTLLN VMSGYVGATE RIVTIEDTAE LQLHHSHVVR LETRPPNVEG YGEITARDLV KNALRMRPDR IILGEVRGDE VVEVMQAMNT GHDGSMSTVH ANNATDALLR MEMLFGMAGR QMSEVTVRRM IGAAVDLIVQ LVRLRDGTRC ISEVRELVTV RDGNFVTTVL YERDAESGQF VRRDDPVSNP KLQALNAPAR REGPRVGTRW AAPRTRHE
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