| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2058 |
|---|
| Symbol | |
|---|
| ID | 4270192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 2332446 |
|---|
| End bp | 2333543 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638126814 |
|---|
| Product | proline racemase |
|---|
| Protein accession | YP_742890 |
|---|
| Protein GI | 114321207 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3938] Proline racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.272833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCTA AAGCCAGCCT GCGCCAGCTT CGTCTGGTGG ATGTGGACGT GGGCGGGGAT
GTGCACCGGG TGGTGATGGG CGGGGTGGCC CCCTGCCCGG GGCCCACGGT GCGCGACAGC
ATGGACTATC TGGAGTCGCG CGCCGACGGC CTGCGCCGGT TGCTGATCAG CGAGCCCTTC
GGTTACGACT CCATGTGCGT CGACCTGGTC ATGCCCGCCT GCCTGCCGGA GGCGCAGCTG
GGCTACGTCA TCATGGAGGT CATGGGGTAC CCCTTTTACT CCGGTTCCAA CACCATCGCC
ACCGCGGCCG CGGTGCTGGA GGCGGGCCTG GTCCCCATGG AGGAGGGCGA GCAGTCGCTC
TGCCTGGAGG CGCCGGCGGG CCTGACCCGG GTGCGCACGC GCAATCGTGA CGGGGTCGTG
GAGTCGGTGA CCGCGCAGGG CTCGCCGGCC TTCATCCAGG CCAGGGATGA GTCCGTGACT
GTGCCGGGTC TGGGGACGGT GCGCTACGAC CTGGCCTGGA GCGGGGGTTA TTACATCATG
GTGGATGCGG CCAGTCTGGG GCATCGGGTG GCGGAGGCGG AGATCAACGC CATGATCCTG
ACTGCCGATC GCATCGTCAA CGCCGTGCAG CGTGAATTCC GTTATCAGCA CCCGGAACTG
GGGGCCGTGG GGCTGCCCCG GTTCCTGCAT TTCATGGGCC CCGTAGAGCG ACGCGCCGAC
GGCAGATTGT GGGCCGCCTC CGCCACCTAT GGCCATCCGG GGGTGATATG GCGCTGTCCC
ACCGGCACCG GGACCTCGGC CCGACTCGCG CTGATGGCGG CCCGGGGGGA GATTACGCCG
GGTGTGCCCC TGGAGACGGT CTCGCCCGCC GGCAACGCCT TCACCGGCGT GATCAACGGC
TTCTCCAGCG TGGGCGGGCA CCAGGCGGTG GACACGGCCA TCACCGCACG ACCCTACCCC
GTGGCGAACA TGGATATGAC CATCGATATC GACGCCCCCA TGATGCGGCC CTACCAGCTA
CACCACATCC TAATCACCCC CGGTAATGCC CTGACCGCCG CCGGGCGCTG CGATCAGAAT
CGCCGGTCGT CGTCCTGA
|
|---|
| Protein sequence | MRAKASLRQL RLVDVDVGGD VHRVVMGGVA PCPGPTVRDS MDYLESRADG LRRLLISEPF
GYDSMCVDLV MPACLPEAQL GYVIMEVMGY PFYSGSNTIA TAAAVLEAGL VPMEEGEQSL
CLEAPAGLTR VRTRNRDGVV ESVTAQGSPA FIQARDESVT VPGLGTVRYD LAWSGGYYIM
VDAASLGHRV AEAEINAMIL TADRIVNAVQ REFRYQHPEL GAVGLPRFLH FMGPVERRAD
GRLWAASATY GHPGVIWRCP TGTGTSARLA LMAARGEITP GVPLETVSPA GNAFTGVING
FSSVGGHQAV DTAITARPYP VANMDMTIDI DAPMMRPYQL HHILITPGNA LTAAGRCDQN
RRSSS
|
|---|
| |