| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2001 |
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| Symbol | |
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| ID | 4270475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 2269237 |
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| End bp | 2269818 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638126757 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_742833 |
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| Protein GI | 114321150 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.849251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.236756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGAAC TCAGCCGTCG AATCCTAACC CGACTCGCTG TGGCCGTGAT GGTGCTGTCC
ACCGGCTGGA TTATCTTCGA GGCCCTGCGC ACGGACCCGG CGCCGGGCGA GGTGGCCCAC
AAGGCGGCGG ACCGCGCCTT TGCCGACGGC CACTATGAGC GTGCCCTGCG CAACTACCGC
GATGCCCTCC AGGCGGACCC CGAGCGTATC GATGCCATTC GAGGCAAGGC CCGCACCCTG
CTGCAGAAGG GGCGCCATGA GGAGGCCGTC CACTGGTTTG ATCAGGCCAT CGAACGGGTG
CCCGGGTTTC CCGGGACCTA TGCCAACCGG GGGATTGCTT ACGACCGCAT GGGGCGCTTT
GAACAGGCGC TGGCGGACTA TGAATACGCC CTGTACCTGG ATGACGGGGT GGCGGACGGG
CCAGGCTGGA TCACCCGCCT GCTGCACATG GACGAGCCAC CACCTACGGT GGCGGATCGC
GCCGATTACC TGCGGGCCCA GCTGGCACTC CCCGAGGAGG AACGCATGCT GAGCATGCCG
GAAGAGGATG CGGCGCAGCG GACCTATCGG CAGCGGCCCT GA
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| Protein sequence | MDELSRRILT RLAVAVMVLS TGWIIFEALR TDPAPGEVAH KAADRAFADG HYERALRNYR
DALQADPERI DAIRGKARTL LQKGRHEEAV HWFDQAIERV PGFPGTYANR GIAYDRMGRF
EQALADYEYA LYLDDGVADG PGWITRLLHM DEPPPTVADR ADYLRAQLAL PEEERMLSMP
EEDAAQRTYR QRP
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