Gene Mlg_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1986 
Symbol 
ID4268529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2256241 
End bp2256558 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content60% 
IMG OID638126742 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_742818 
Protein GI114321135 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000114439 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0153833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTTA GTGGGTATTC TGTCAGCGAG CTGAATAAGC TGAAAACCGA TATTGATCGT 
GAGATCCGTC AGCGCCGTAA GCAGCAGGCA AAAGAGGCGC AGCGGGAGCT GAAGGCGGTA
GCCGAAAAGT ATGGTTTTGC GCTCAACGAA CTGGTGGGCA ATGCCCAGCC CGCCAGCGGG
CAAAAGGCCA AGGCAAAGGC CATCTATCGC CACCCGGAGG ATCCTTCCAA GACGTGGTCG
GGCCGCGGGC GCCGTCCGCG CTGGATCAAC GAGTGGGAAC AGAAGGGGCG CGATATCGAT
GAGCTGCGCG TCGGCTGA
 
Protein sequence
MDLSGYSVSE LNKLKTDIDR EIRQRRKQQA KEAQRELKAV AEKYGFALNE LVGNAQPASG 
QKAKAKAIYR HPEDPSKTWS GRGRRPRWIN EWEQKGRDID ELRVG