| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1773 |
|---|
| Symbol | |
|---|
| ID | 4269159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2029648 |
|---|
| End bp | 2030781 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638126531 |
|---|
| Product | spermidine/putrescine-binding periplasmic protein |
|---|
| Protein accession | YP_742609 |
|---|
| Protein GI | 114320926 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGG TTAGACGACG GATCCTGGCC CTTGCCCTGG TGCTGCTGCT CTGCGCACCG
GCCCCGGCCA CGACGGCGGA CGACGCCCTG GTCGTGCTGA GCTGGGGCGG CGCCTACGAG
CGTGCCCAGC GCGAGGCGCT GTTCGAGCCC TTCACCGCCC GGACCGGCAT CCCGGTGGAG
GTGCAGCGCT ACGACGGGGG CCTGGAGGCA CTGCGCCGGG CCGTGGCCGA CGGCGAGGTG
CCCTGGGACC TTATCGACAT GACCCGCAGT GACGCCATGG CCGCCTGCGA GGAGGGCCTC
CTTGCGCCGC TGCCGCCCGA CCTGGCGGCG CCAGCACCGG ACGGCACACC GCCAGCCCGC
GATTTCCTGC CGGACGCCAT CGGCCGCTGC GCCCTCACCC ATACGGTGTT CGCAACCGTG
GTAGCCTACC GGCCCGAAGC CTTCCCCGGC CGGCGCCCCA CCGCCATCGC CGATCTCTTC
GACCAGCAAC GCTTCCCCGG CCCCCGTGCC CTGCAGCGCA CCCCGGCGGT CAACCTGGAG
TGGGCATTAC GCTCCTACGG GGTGCCCCGG GAAGAGCTCT ATCGACTGCT CAGCACCCCT
CGCGGCCTGC GCCTGGCCCT GGGTCGGCTC GCAGAGCTCG AGGCGATCCA CTGGTGGGAG
GCCGGGGACA CCCCGGCGCG GCTGCTCGTC GAGGGCCGGG TGGTGATGGC GTCGGGCTAC
AACGGCCGCT TCTTCGACGC CATGCTCCGG GATGATGCCC CCATCGAGAT CCTCTGGGAC
GGCCAGGTCC AGGAGCACGA GGCCTGGGCG GTTCCCCGCG GCGCCGCCCG CCCCGAGGCC
GCCCGGGATC TCATCCGCTT CGCCACCACC ACCGAGCGCC TCGCCGAACT CGCCCGGCGC
ATTCCCTACG GGCCCGCGCG TGACTCGGCC GCCCTCCAGG TCACCACCCA CCCGGACACC
GGCCTGGATA TGCGTCTGCA CATCCCCACC CATCCGCTGA ATGCCGCAGG CGCCATCGTC
AAAGACGAAG ACTGGTACGC CCACACCCAA TCGCGACTGG ACGACTACTT CGAGGCCTGG
CTGGCTACCG ACGGCTGCCG GATCTCCCTG AATGAGCCGT GCCCGTCGCC GTGA
|
|---|
| Protein sequence | MATVRRRILA LALVLLLCAP APATTADDAL VVLSWGGAYE RAQREALFEP FTARTGIPVE
VQRYDGGLEA LRRAVADGEV PWDLIDMTRS DAMAACEEGL LAPLPPDLAA PAPDGTPPAR
DFLPDAIGRC ALTHTVFATV VAYRPEAFPG RRPTAIADLF DQQRFPGPRA LQRTPAVNLE
WALRSYGVPR EELYRLLSTP RGLRLALGRL AELEAIHWWE AGDTPARLLV EGRVVMASGY
NGRFFDAMLR DDAPIEILWD GQVQEHEAWA VPRGAARPEA ARDLIRFATT TERLAELARR
IPYGPARDSA ALQVTTHPDT GLDMRLHIPT HPLNAAGAIV KDEDWYAHTQ SRLDDYFEAW
LATDGCRISL NEPCPSP
|
|---|
| |