Gene Mlg_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1311 
Symbol 
ID4268650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1511312 
End bp1512043 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID638126064 
ProductABC transporter related 
Protein accessionYP_742150 
Protein GI114320467 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.355082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.912591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCCC CGCGATGCGA CCGGTGCGGC AGGAGGCGGC GCATGCGTGT GACGCTGGAG 
GCACTTCGGA AGGCGTACCG GGAGGGGGAA CACCGGCGGG TGGTGCTCGA CGGGACCGGC
CTGCAGGTGG CCAGCGGTGA GCACGTGGCG CTGATGGGGC GCAGCGGTTC GGGTAAGAGC
ACCCTGCTCA ACCTCATCAG CGGCATGGAC CGGCCGGATG CGGGCGAGGT CTGGCTGGGC
GAGACGCCGC TCAGCCGCCT GGACGAGGGC GCGCGCACCC GCTTCCGACG TCACCACATC
GGTTTCGTCT TCCAGTTCTT CAACCTCATT CCCACCCTCA CCATCGAGGA GAATCTGCTG
TTGCCGTTGG AACTGGTGGG ACGCCTCGAC GATGCCCCGC GGGCCCGGGA GCTGTTGGCG
GCGGTCGGGT TGTCGGACCG CGCCCGGGCC TTCCCGGACC GGCTCTCCGG TGGCGAGCAG
CAGCGTGTGG CGCTGGCCCG GGCCCTGGTG CATCGGCCGC GGCTGCTGCT CGCCGACGAA
CCCACCGGAA CCCTGGACGC CGAGACGGGG GACCGGGTGT TGGCCCTCCT GCAGCACTTG
GTCCGGGCCG GGGGGATGAC CCTGATCACG GTGACCCACA GCCGGGAGGT GGCCGCCGCG
GCCGATCGCG TCTTCCGCCT GGCGGAAGGG CAACTGCATG CGGTGGACCG GCTCGACGTG
GCGGGGGTCT GA
 
Protein sequence
MPPPRCDRCG RRRRMRVTLE ALRKAYREGE HRRVVLDGTG LQVASGEHVA LMGRSGSGKS 
TLLNLISGMD RPDAGEVWLG ETPLSRLDEG ARTRFRRHHI GFVFQFFNLI PTLTIEENLL
LPLELVGRLD DAPRARELLA AVGLSDRARA FPDRLSGGEQ QRVALARALV HRPRLLLADE
PTGTLDAETG DRVLALLQHL VRAGGMTLIT VTHSREVAAA ADRVFRLAEG QLHAVDRLDV
AGV