| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0154 |
|---|
| Symbol | |
|---|
| ID | 4269285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 178007 |
|---|
| End bp | 180262 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638124878 |
|---|
| Product | RND efflux transporter |
|---|
| Protein accession | YP_740999 |
|---|
| Protein GI | 114319316 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1033] Predicted exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGGC TGCTGGACCG CCCCCGTCTT GCCCTGGCCG TGCTCGCGCT GCTGGTGCTG
GGGCCGGGGC CGATGCTGCT GCAGGTCAAC CTGGACAACG CGCCGGAGGC CTATTTCCCG
CTGGACGCCC CGGCAGTGGT GCTGGACAAC GAGCTGCGGG AGGAATTCCC CCAGGATCAG
GTGCTGGTGG CGCTGTTCGA GGGGGAGCAC CTGTTCGAGG CGGATTTCCT TGGCCGGCTG
CACGCCCTCG CCGAGGCCCT GGAGGGCAAG GAGCGGGTGG AGCGGGTGCT CGGCCTGACC
AGCACCGACC ACATCCGCGC CACGGCGGAC GGCTTTGCCG TGGAACCGCT GGTGGACGCC
TCCGCGCTGG ACCGGTTCGA CCCCGCGGGC TGGCGCGCGC GGGCGCTGGG CGACACCTTT
GCCCCCGGCC TGATTGTCGC CCACGACGGG GAGGCCACGG CCCTGGTGGT CCGCCCCCAC
GTGCTGGAGG ACAGCCTGCA GCGCCTGGAG CTGGAGCAGT CGCTGCGCCG CGCCATCAAG
GCCCACGGCC TGAGCGCGGA GCTGACCGCC ATCGCCGGCC ATGTGGCGCT GGACGTGGCC
CAACTCCGGG CCATGATCGG CGACCTGGCC CTGCTGGTGC CCGGCACCAT GGGCATCGGC
CTGCTGCTGC TCTGGTGGTT GTTCCGGCGC TGGCTGGTGG TGGGGCTGGC CGCGGCCACC
ATCAGCGCCG TCACCGGCTC GGCGCTTACC CTGCTGGTAG TCACCGGCAA GCCCTTCACC
CTGATCACCG CCATCATGCC GCCGCTGCTC ACCGCGCTGA CGGTGGCGAT GATGATGCAT
TACTTCAACG CCGTGCTGCA CGCCGCCCAG CGCGGTTACA CCGGCCGCGC CCGGGTGGAG
GCGGCCTTGC AGGCCGTGGC CCGGCCCACC CTGTTCATGG CCCTGACCAC CGCCGCCGGC
CTGGCCTCGC TCAGCGTCAG CCCCATCCGC CCCATCGAGG CCTTCGGCCA GGTCTCCGCC
TTTGGGGTGC TGGTGGCCGC CGCCTGCGTA CTCGGGCTGC TGCCGCCGAT CCTGGCCCGG
TATGATCGCG GCCCCTGGGT GCGGCAGCAG CGGGGCATGC GCCGGCTCGA CGGCTTCCTG
CGGCTGGCCG CGCACCTGGC GGTACGCCGG GCCGGCTGGG TGGTGGCCGC GGCGGTGCTG
GTCTTCGCTG TCGCCATCCC GCAGATCCGC CACGTGGAGG TGGAAACCGA TCTTTACGCC
TTCTTCGACG AGGGCCACGA GATCACCCGC GCCACCCGCC AGGTGGAGGA GCGCCTCGCC
GGGGTGATGG CCATGGAGGT GGTCTTCGAC GGCCCCGACT GGGACAGCCT GATGGCGCCG
GAGCGGCTGC AGGCCATCCA CGCGGTGCAG GCCTGGCTGG ATGCCCGCCC GGAGGTGGAT
TACAGCCTGT CGCTGCCGGA TCTGGTGGCG GAGATGCACT GGGCCTTCAA CGAGGAGGAC
CCGGACTACC GCGCCGTGCC CGACAACGAA CCGCTGGTCG CCCAGTACCT GTTCATCTAC
GACGGCCAGG ACCTGTGGGA CGTGGTGGAC CGCGACTTCA CCCGCAGCCG GCTGTTGCTC
AACCTCAACG CCACCGGTGC CCAGGAACTC AATACCCTGA TGGCTGACCT GCGGGGCCAC
CTGGAGGCCG AACCGCCGGC CGATCTGGCG TGGGATATCG CCGGTATGGG CCGGCTGTTC
GCGGATCAGG AGCGGCTGCT GATCCAGGGG CAGTTGCACA GCTTGATGGT CGTGGTGGCG
CTGCTCGCCG TGCTGATGCT CCTGATGTGG CGGTCCGTCT CCGTGGCCGC CGTCAGTATG
GTGCCCAACC TCACCCCCAT CGTGCTCATC TTCTCGCTGA TGGGTCTGCT GGGTATCTGG
CTGGACATGG CCACCGCCAT GATCGCCAGT GTCGCGGTGG GGATCGCCGT GGACGACACC
ATCCACATCC TCCATGCTTA CCTGCGCCGC CGGCGCGCCG GCAGCCCGGC GGCCTGGGCG
GTGGCCCGCA GCTTCCGCCA GAGCGGGCGG GCGGTGACGG CCACCACCCT GGTGTTGATC
GCCCAGTTCC TGCTGGTGGC CCTGTCGGAC TTCCAGCCCA CCCAGAGCTT CGGCCTGCTC
ACGGCCTTCG GGCTGGCAGC GGCGCTGGTG TACGACCTGC TGGTGCTGCC GGCAGTGCTG
GTGCTGCTGA GCCGGGTCCA ACGGTTGAAA GAATGA
|
|---|
| Protein sequence | MRWLLDRPRL ALAVLALLVL GPGPMLLQVN LDNAPEAYFP LDAPAVVLDN ELREEFPQDQ
VLVALFEGEH LFEADFLGRL HALAEALEGK ERVERVLGLT STDHIRATAD GFAVEPLVDA
SALDRFDPAG WRARALGDTF APGLIVAHDG EATALVVRPH VLEDSLQRLE LEQSLRRAIK
AHGLSAELTA IAGHVALDVA QLRAMIGDLA LLVPGTMGIG LLLLWWLFRR WLVVGLAAAT
ISAVTGSALT LLVVTGKPFT LITAIMPPLL TALTVAMMMH YFNAVLHAAQ RGYTGRARVE
AALQAVARPT LFMALTTAAG LASLSVSPIR PIEAFGQVSA FGVLVAAACV LGLLPPILAR
YDRGPWVRQQ RGMRRLDGFL RLAAHLAVRR AGWVVAAAVL VFAVAIPQIR HVEVETDLYA
FFDEGHEITR ATRQVEERLA GVMAMEVVFD GPDWDSLMAP ERLQAIHAVQ AWLDARPEVD
YSLSLPDLVA EMHWAFNEED PDYRAVPDNE PLVAQYLFIY DGQDLWDVVD RDFTRSRLLL
NLNATGAQEL NTLMADLRGH LEAEPPADLA WDIAGMGRLF ADQERLLIQG QLHSLMVVVA
LLAVLMLLMW RSVSVAAVSM VPNLTPIVLI FSLMGLLGIW LDMATAMIAS VAVGIAVDDT
IHILHAYLRR RRAGSPAAWA VARSFRQSGR AVTATTLVLI AQFLLVALSD FQPTQSFGLL
TAFGLAAALV YDLLVLPAVL VLLSRVQRLK E
|
|---|
| |