Gene Shewmr7_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3984 
Symbol 
ID4257842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4728356 
End bp4729426 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content48% 
IMG OID638124673 
Productglycosyl transferase, group 1 
Protein accessionYP_740018 
Protein GI114049468 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.127116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCGCCATTTT TTGCCATAAC TTTTTCTCGA ACGGCACAGT CAAAATCGCC 
TTATCCCAGG CCGAAGTGCT GCAGGAAGCC GGGCAAGATG TTCACCTCTT TGTGTTCCAT
AAAGAGGGGG ATTTTATGCC ACCAGAAAAT GTGACGATTC ATTACCTGTA TGAAGCTGGC
CAAAAGCCAA CTCTACAGGA GCAAAGACAA CACCTAAAGG CCAAGGTGGC CGAAGCGGAA
CAATCGGGTA AGTTCTCGCT ATTCTTAAGT AACTCAACCG ACTGCGATGT AGTTGTGTCG
GGTTGCGACT TCGATCCCTG CTATTACTTT TGCCACTGCG CCCTTAAGCA AGAACTCTTG
ATGGAATTAA AGCGTGGTCC AGTGCATTTC TGGCGTCGCT GGAAAAAGGC TAAGGCACTG
ATTGGCAAAA AGATCATTAC TGTTTCCAAT GGCATCGCCG ATGAGCTTAG AGCCACTTCT
TGGCTGAAGC CACAAAGCGT TCAGACCATC TATAATCCCT TTAGATTGGA AGAAATCCGT
AAGAAGACTC AGGAAGAAAT TGCCGAGATC CCAAGCGAAC CTTATATGAT CCATGTCGGC
CGTGTGACAC GGCAAAAGCG CCACGACATT TTATTTAAGG CGCTCAGGGA TATGCCAACG
GCCCCTAAGC TTGTCCTGCT GTGCAATCGC CCAAAGAAGG CACGCAAACT CGCCAAGAAA
TACGGTGTCG AACACAGAAT CATCACACCT GGGTTTCAAC ACAATCCCTA CGCCTGGATT
GCCAAAGCAG AGTTAATGTT ACTCAGCTCA GATTTTGAAG GCCTACCGAC CGTTGTGATT
GAGTCTTTAG CCTGTGGCAC ACCTGTCGTC AGTACTGATT GTCCACACGG GCCAAATGAA
ATTCTCACAG GGCATTTGGC CCAATATCTC GTCCCCGTTC GCCAACCTGC GCTGTTGGCA
CAAAAAGCGC TGGAGTGTTT GGCCTCACCA CCAGCTTTAG ACAATCTAGA AATATTAAAG
GCCGTAGACA GCCAATATAT TGCCGCTCAA TATATCCACT TAGCACAATA A
 
Protein sequence
MKKIAIFCHN FFSNGTVKIA LSQAEVLQEA GQDVHLFVFH KEGDFMPPEN VTIHYLYEAG 
QKPTLQEQRQ HLKAKVAEAE QSGKFSLFLS NSTDCDVVVS GCDFDPCYYF CHCALKQELL
MELKRGPVHF WRRWKKAKAL IGKKIITVSN GIADELRATS WLKPQSVQTI YNPFRLEEIR
KKTQEEIAEI PSEPYMIHVG RVTRQKRHDI LFKALRDMPT APKLVLLCNR PKKARKLAKK
YGVEHRIITP GFQHNPYAWI AKAELMLLSS DFEGLPTVVI ESLACGTPVV STDCPHGPNE
ILTGHLAQYL VPVRQPALLA QKALECLASP PALDNLEILK AVDSQYIAAQ YIHLAQ