Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3976 |
Symbol | |
ID | 4255981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4720869 |
End bp | 4721528 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124665 |
Product | hypothetical protein |
Protein accession | YP_740010 |
Protein GI | 114049460 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.417481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGAC TCTATAAGGC GATTTTTATC GTCTTTATTT TGCTGGTGTT AATGTTTGCG GCCCAGCAAG GGTTATTCGA GCATGTGACC GATAGCAATT GGGTGGCACA CTTTATTGCC GCTCAAGGGG CCTATGCGCT GGCGGTATTG CTGATAGTTG GCGCCTTGTT TACCGCTGTC GGAGGGCCGA GGCAGGTGAT CGCCTTTGTA TTCGGCTTTG CCCTCGGTGG CATCTATGGT GGCTTATTTT CCACCTTAGC GGCATTGCTG GGTTGTGTGC TGGCGTTTTA TACCGCGAGA TTAACCATTC GAAGCAGTCT GCAACGACGT TTTGGCAATC GTTTACAAAA GTTTGAGGCA TTGATCATTC ATCGAACTTG GTTAAAAGTC TTAATGATCC GCCTGTTACC CGTGGGCAGT AATCTGCTAA CGAATCTGTT TGCGGGGGCG ACACACATCC CCGCGGGGGG ATTTATGTTT GGCAGCGTGC TGGGTTATTT GCCGCAGATG CTGATATTCA GTTTTGCGGG CGCGGGCATT GGCTTGTCTG ATCATAACCA ATTGGGGATC AGTATCGGGC TGTTTATTAT CTCGAGTCTT ATCGGCGCTT ACCTTTACCG TTCGAGCCTG CGTAAGCAGG TGGATGAATT GGAAAACTAA
|
Protein sequence | MKRLYKAIFI VFILLVLMFA AQQGLFEHVT DSNWVAHFIA AQGAYALAVL LIVGALFTAV GGPRQVIAFV FGFALGGIYG GLFSTLAALL GCVLAFYTAR LTIRSSLQRR FGNRLQKFEA LIIHRTWLKV LMIRLLPVGS NLLTNLFAGA THIPAGGFMF GSVLGYLPQM LIFSFAGAGI GLSDHNQLGI SIGLFIISSL IGAYLYRSSL RKQVDELEN
|
| |