Gene Shewmr7_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3976 
Symbol 
ID4255981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4720869 
End bp4721528 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content50% 
IMG OID638124665 
Producthypothetical protein 
Protein accessionYP_740010 
Protein GI114049460 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.417481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAC TCTATAAGGC GATTTTTATC GTCTTTATTT TGCTGGTGTT AATGTTTGCG 
GCCCAGCAAG GGTTATTCGA GCATGTGACC GATAGCAATT GGGTGGCACA CTTTATTGCC
GCTCAAGGGG CCTATGCGCT GGCGGTATTG CTGATAGTTG GCGCCTTGTT TACCGCTGTC
GGAGGGCCGA GGCAGGTGAT CGCCTTTGTA TTCGGCTTTG CCCTCGGTGG CATCTATGGT
GGCTTATTTT CCACCTTAGC GGCATTGCTG GGTTGTGTGC TGGCGTTTTA TACCGCGAGA
TTAACCATTC GAAGCAGTCT GCAACGACGT TTTGGCAATC GTTTACAAAA GTTTGAGGCA
TTGATCATTC ATCGAACTTG GTTAAAAGTC TTAATGATCC GCCTGTTACC CGTGGGCAGT
AATCTGCTAA CGAATCTGTT TGCGGGGGCG ACACACATCC CCGCGGGGGG ATTTATGTTT
GGCAGCGTGC TGGGTTATTT GCCGCAGATG CTGATATTCA GTTTTGCGGG CGCGGGCATT
GGCTTGTCTG ATCATAACCA ATTGGGGATC AGTATCGGGC TGTTTATTAT CTCGAGTCTT
ATCGGCGCTT ACCTTTACCG TTCGAGCCTG CGTAAGCAGG TGGATGAATT GGAAAACTAA
 
Protein sequence
MKRLYKAIFI VFILLVLMFA AQQGLFEHVT DSNWVAHFIA AQGAYALAVL LIVGALFTAV 
GGPRQVIAFV FGFALGGIYG GLFSTLAALL GCVLAFYTAR LTIRSSLQRR FGNRLQKFEA
LIIHRTWLKV LMIRLLPVGS NLLTNLFAGA THIPAGGFMF GSVLGYLPQM LIFSFAGAGI
GLSDHNQLGI SIGLFIISSL IGAYLYRSSL RKQVDELEN