Gene Shewmr7_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3969 
Symbol 
ID4255974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4713587 
End bp4714294 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content51% 
IMG OID638124658 
ProductABC transporter related 
Protein accessionYP_740003 
Protein GI114049453 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CCAAACTGAT CGCCCGTGAC TTGGAAATGT CCTTTGGCCC GCGCTTATTA 
TTCAAAGCCC ATAGCCTAGA GTTGTGCCAA GGGAACGTCA TTTATTTGCA GGGTGACAAC
GGCTCTGGCA AGTCGACCCT GATGAAGATT CTCGCGGGTT TACAGCCGCC ATCTAAGGGC
AAGATTGATG TCAGCGGCTT TAAAAAGGAC GCATGGTGGA CACGCAATCC TTTGCTCGGC
AAAGCCGTTT ACCTCCACCA GCATCCCTAT CTATTTGATG GTACAGTCAA TTACAACCTG
ACCTACGGGC TCCCTTTTGC GGCCTCAAAA ACCGAAGCCA AACGTAGAAT TGGCCAAGCA
ATTGAGATGG CGCAACTAGG CTCACTATTG CAAGCTAGAG CCAGCAATTT ATCCGGCGGC
GAAAGGCAAC GCCTCGCCAT CGCACGCGCT TGGATTTTGC AGCCAAAGTT ACTGATGCTC
GATGAGCCGA CCTCCAATAT GGATAAGGAC TCCCAAGCCT TAGTGCTGCA AATGATCCAA
CAGCTCAAAC AGCAAGGGAC GGGAATGCTA TTAAGCAGCC ACCAAAACTG TGCGCTCACC
GCCATTTGCG AGCAGCAGTG GCACATTGAA GACCAGCAGG TGATAACCTC CCGTCAGCAA
ACGCCCACAA ACTCCACACA GGGATCTTTA TATGTCGTTG CAAATTGA
 
Protein sequence
MTQAKLIARD LEMSFGPRLL FKAHSLELCQ GNVIYLQGDN GSGKSTLMKI LAGLQPPSKG 
KIDVSGFKKD AWWTRNPLLG KAVYLHQHPY LFDGTVNYNL TYGLPFAASK TEAKRRIGQA
IEMAQLGSLL QARASNLSGG ERQRLAIARA WILQPKLLML DEPTSNMDKD SQALVLQMIQ
QLKQQGTGML LSSHQNCALT AICEQQWHIE DQQVITSRQQ TPTNSTQGSL YVVAN