Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3958 |
Symbol | |
ID | 4255963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4699755 |
End bp | 4700438 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638124647 |
Product | cobalt transport protein |
Protein accession | YP_739992 |
Protein GI | 114049442 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGTTA GTTGTCGTCG ATGGCGACTA CGTGCCCGCC GGCGTTGGAG TCGCGAGAAG CAAGAAACCA CCCTGTGCGC GCTGTCGCTG TTTTTGGTCT GCGTACTTTC CGCCTGCGCT TTTGTATTGC CCGCCGATTT ACTGCTACCG CTGGCGGCCG TGAATGGCTT GCTCGTGCTC CATGGTTTAG CGCGCCGAGG CAGTATTATG GGCGTGGTTA AACTCGGCGT GATTCAACTG ACGATTACCT TAAGTCTTTA TCTACTGCTC TATGGTGTTG AACACCTCGC CCAAGGCGCC GTGGTGGTGG GACGCATTAT TTTAGCGACT ATCCCCGGAT GGTGGTTGTG TATCACGGCG GCGCCTGAGC GTATCGGCGA AGTATTAAGT GCATTTTTGC CGAGCAAATG GGCCTTTGTG GTGACAGCAT CCTTGAGTTT GCTGCCCTAT ATGGCGGATG AAGTGCGCGA GATTTACCAG ATCCAGTGTC TGCGCGGCGC ACGTATTACC CCTAAGGCGT TGCGTAATCC CAAAAACTGG CCAGAACTGG TGTACTGCGT GCTGTTTCCT GTGTTAATCC AATTGCTTAC ATTATCTCGC CAGATGGCGG TTGCGGCCCA GAGTCGCCAC TTTGGTAAGA GTTCACGTGC CACCCATTGG CATTCACCCA GAGACAAAAA ATGA
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Protein sequence | MWVSCRRWRL RARRRWSREK QETTLCALSL FLVCVLSACA FVLPADLLLP LAAVNGLLVL HGLARRGSIM GVVKLGVIQL TITLSLYLLL YGVEHLAQGA VVVGRIILAT IPGWWLCITA APERIGEVLS AFLPSKWAFV VTASLSLLPY MADEVREIYQ IQCLRGARIT PKALRNPKNW PELVYCVLFP VLIQLLTLSR QMAVAAQSRH FGKSSRATHW HSPRDKK
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