Gene Shewmr7_3941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3941 
Symbol 
ID4257834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4682662 
End bp4683768 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content50% 
IMG OID638124630 
Productgamma-glutamyl kinase 
Protein accessionYP_739975 
Protein GI114049425 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACT CTCCCCGTAA ACGTATCGTC GTCAAAGTGG GGAGCGCCTT AATCGCGCCC 
CACAAGCAAG GTTGCAGTAG CCATTATCTC TTGGGTATCG CGCAGTTTAT TACTTACTGC
CGCGTCCAAG GTATCCAAGT GGTACTGGTT TCATCCGGCT CGGTTGCCGC TGGTTGGCAT
CATTTTGAGG GCCAAACTCA GCCGAGTGTC ACGGTGAAAA AGGCCATGGC GGCTGCGGGG
CAGGCGGATA TGATGGCGAC GTGGAATAAG CTATTTGATT TTCCTACCGC CCAACTGCTG
CTGACCCATG GCGACTTACG TAATCGCGAG CGTTATATCA GTATTCGAGA CACGATTTTT
AGCCTGCTCG AACACGGTTT AATGCCGATC ATCAATGAAA ATGATGCCGT TACCGCCGAC
AAACTTAAGG TTGGCGATAA CGATAATCTC TCGGCCATGG TGGCAGCAGC GGCCGATGCC
GACACCTTAG TGATTTGCTC GGATGTGGAT GGACTCTATG ATCAAAATCC CCACGAACAT
CCCAATGCCA AATTGATAAA GCAAGTCACT GAAATCAATG CCGATATCTA TGCGATGGCA
GGAGGCGCCA GCAGCGATGT TGGCACCGGA GGCATGCGCA CTAAGATCCA AGCCGCCGAG
AAAGCTATCT CCCACGGCAT TGAGACCTTT ATTATCAATG GCTTTAATGC CGACTCCTTT
AGCCAACTGC TAAAGGGGCA AAATCCGGGC ACCCTCTTTA CCCCCTACGA AAAACCGATG
CAGGAGCATT TGCATTGGAT GACCCACACC TCGCAAGCGC AGGGCGAAGT GATCGTCGAG
GATGATTTTG ACCTCGCACT CGATCAGCAC AGCGAGCAAT TAACCAGCGA TGATGTGGTT
GAAGTCAAAG GGGATTTCTC AGTGGGCGAC ACCATTTTGG TGCGTAAAGG CGATGGCACT
AAGTTGGCGA AAGCCAAATC TAACTACAGC AGTTGCCTAC TGAGTTTTAT TACCGAGCAG
GATGATCAGG CGTTTGCCAG TGAATTCCAG CAAAAAACCG GCCCCATCAT TTCCGATAAG
AATATCGCCA TTCTTAAATC CATTTGA
 
Protein sequence
MTDSPRKRIV VKVGSALIAP HKQGCSSHYL LGIAQFITYC RVQGIQVVLV SSGSVAAGWH 
HFEGQTQPSV TVKKAMAAAG QADMMATWNK LFDFPTAQLL LTHGDLRNRE RYISIRDTIF
SLLEHGLMPI INENDAVTAD KLKVGDNDNL SAMVAAAADA DTLVICSDVD GLYDQNPHEH
PNAKLIKQVT EINADIYAMA GGASSDVGTG GMRTKIQAAE KAISHGIETF IINGFNADSF
SQLLKGQNPG TLFTPYEKPM QEHLHWMTHT SQAQGEVIVE DDFDLALDQH SEQLTSDDVV
EVKGDFSVGD TILVRKGDGT KLAKAKSNYS SCLLSFITEQ DDQAFASEFQ QKTGPIISDK
NIAILKSI