Gene Shewmr7_3894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3894 
Symbol 
ID4257926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4620337 
End bp4620795 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content37% 
IMG OID638124583 
Producthypothetical protein 
Protein accessionYP_739928 
Protein GI114049378 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA AATTACTCCA AAAATATCAA TTACATAACC TCAACTCTTC AAACCATATC 
TGGTATAAAG TCGGACTACC TGCAAGTGAA GGTACTCTCT TGCTTTATGA AATAGAAAAA
GGATTTGATG TCGAAATCAT TCAATTGTTA GCTAACGAGC TAAATTGGCC AATCAATAAA
TTTGTTCAAC TCATCGGCTT TAGCCGCTCA ACCTTTAATC GCCGCATGAA ACGTCATCGC
TTAACAAGTC AAGAAAGTGA AGTTGTTGCC AGAGTTATCA GAGTCTACGA ATCCATACTG
ACAATGTTCA ATGGAGATAA AGTAAAAGCA CTACAATGGA TTGAGGAAAC AGCTGTCGCT
TTAGGAAATG AGAAACTAGT GCTGTTAATG AAGTCTGAAT CGGGTGCGAA TGACATCATC
AAACTTACTC ATCGATTAAT GCATGGGGTT TATGTTTAA
 
Protein sequence
MNYKLLQKYQ LHNLNSSNHI WYKVGLPASE GTLLLYEIEK GFDVEIIQLL ANELNWPINK 
FVQLIGFSRS TFNRRMKRHR LTSQESEVVA RVIRVYESIL TMFNGDKVKA LQWIEETAVA
LGNEKLVLLM KSESGANDII KLTHRLMHGV YV