| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3888 |
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| Symbol | |
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| ID | 4257920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4612352 |
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| End bp | 4616818 |
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| Gene Length | 4467 bp |
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| Protein Length | 1488 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638124577 |
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| Product | phage integrase family protein |
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| Protein accession | YP_739922 |
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| Protein GI | 114049372 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT GCTTTCATGC AACTTACGCT AAAGCCCAAC AGGCCACCCT AGCCCTCGGC
ATCACGACGC AGCGAGATTA CAAGCGGCGC TACCGTGAAG ACCCACGCTT GCCCTATAGC
CCGGATGAAA TCTACGCCGC CGACTGGCAA TCCTGGCCCC AGTTTTTAGG GACTGCAGAT
AAGCTCTATC CCACTTGCGC TGATGCCCAA CAGGCCACCC TAGCCCTCGG CATCACGACG
CAGCGAGATT ACAAGCGGCG CTTCCGTGAA GACCCACGCT TGCCCTCTAG CCCGGATAGA
ATCTACGCCG CCGACTGGCA ATCCTGGCCC CAGTTTTTAG GGACTGCAGA AAAGTTCTAT
CCCACTTACG CTGATGCCCA GCAGGCCGCC CAAGTCCTAG GCATCACATC GAGGGAAGCG
TACCTACAGC GCTACCGTGA AGACCCACGC TTGCCCTCTA GCCCGCATAG AACCTATGCC
GCCAATTGGC AATCCTGGCC CCAGTTTTTA GGGACGGCAG ATAAGTTCTA TCCCACTTAC
GCTGATGCCC AGAAGGCCGC CCAAGTCCTA GGCATCAAAT CATGGACAGA GTACATACAG
CGCTACCGTG AAGACCCACG CTTGCCCTCT AGCCCGGATG AAATCTACGC CGCCGACTGG
CAATCCTGGC CCCAGTTTTT AGGGACGGCA GATAAGTTCT ATCCCACTTA CGCTGATGCC
CAGCAGGCCG TCCTAGGCAT CACATCGAGG GAAGCGTACC ACCAGCGCTA CCGTGAAGAC
CCACGCTTGC CCTATAGCCC GCATAGAACC TATGCCGCCA ATTGGCAATC CTGGCCCCAG
TTTTTAGGGA CGGCAGAAAA GTTCTATCCC ACTTATGCTG ATGCCCAGCA GGCCGCCCAA
GCCCTCGGCA TCACGACGCT GCGAGATTAC AAGCGGCGCT ACCGTGAAGA CCCACGCTTG
CCCTATAGCC CGGATGAAAT CTACGCCGCC GACTGGCAAT CCTGGCCCCA GTTTTTAGGG
ACTGCAGATA AGCTCTATCC CACTTGCGCT GATGCCCAAC AGGCCACCCT AGCCCTCGGC
ATCACGACGC AGCGAGATTA CAAGCGGCGC TTCCGTGAAG ACCCACGCTT GCCCTATAGC
CCGGATAGAA TCTACGCCGC CGACTGGCAA TCCTGGCCCC AGTTTTTAGG GACTGCAGAA
AAGTTCTATC CCACTTGCGC TGAAGCCCAA CAGGCCGCCC AAGTCCTAGG CATCACATCG
AGGGAAGCGT ACCTACAGCG CTACCGTGAA GACCCACGCT TGCCCTCTAG CCCGCATAGA
ACCTATGCCG CCAATTGGCA ATCCTGGGCA CAGTTTTTAC AGACTGCAGA TAAGTTCTAT
CCGACTTACG CCGAAGCTCA GCAGGCTACC CTAGCCCTCG GTATCACGTC ACGGCCAGTG
TACATACAGC GCTACCGTGA AGACCCACGC TTGCCCTCTA GCCCGGATAG AATCTACGCC
GCCGACTGGC AATCCTGGCC CCAGTTTTTA GGGACTGCAG AAAAGTTCTA TCCCACTGAC
GCTGATGCCC AGCAGGCCGC CCAAGTCCTA GGCATCACAT CGAGGGAAGC GTACCTACAG
CGCTACCGTG AAGACCCACG CTTGCCCGCT ACCCCTGATA AATTCTATGC CGCCGGCTGG
CAATCTTGGA CCGCATTTTT ACTGCCAAAT AGGATAGATA CACTTAGGGT ACTAAAGAAT
GCATGCAAAG TGCTGGGAAT CCGAGACTCT CTTCAGTACC GTCAAATCCA AAAAGACTAT
GCGCAACTCC CTTCAAAACC AGATAAGAAA TTCAACGATT GGATTGATTG GTATGATTTA
CTAGATATTC CCAAACCATA TGAACTTCAT AAGCTAAAAA AAATTGTCCA TTCTCATAAA
TGTACATCTC TAGCTAATTA TAAAAAATTA CGCAGCACAC TGAACGATCC CAAAATGCCA
GCGTCTCCGA TTGATTATTA TAAAGATAAA GGCTGGACCA ACACTTTTGA CTTCTTCGGA
GTCAAAAGAC CGTATCAAGT CCGATATTTT GAACCAGAGT GGAAGCCATG GGGCGATTTG
ATAACCGAGT TTTTGAAAAC AGCCAAAGGG GGAGATACAA AAGTCAAAGA CCTATGTGAA
TTTGTCCGAG AATATATTGA ACCCAATAAG TTCGAAATAT CTCCACTTGA TTACCTCACT
CGTGGCAAAA CAAATATTCA ACCCATGCTC GAACTATTTG AATTAGTACC TATTACTCGA
AAGAAAAAAT GGCTGTTTTC CATCAATGAA TTTTTAGATT GGCTCATCGT AAAATTCTTG
ACCATCGAAG ATGAAGATAC AGGTGAAGTA TCTCGTATAA AAGGAGCAAA AAACCCATTT
TCTCACATCA ATTTTGATGA TGAACAAATA CCTGTTTCAC TTAATGAAAC CAATAAATTG
GCATTGCCTT ATCAATTTGT AAAAAGCGCA CGCGAGTGGA TTTTTCCCCA AACGCAATTT
GAAAAAGTTA GCTATTTAGA ACTTCTTCAT CTACATAAAT TCCAAGCAGA TTGGGTCCCA
ATAGATGAGT CTATTGAAAT TGACCCATCA GATCCTGACT GCGTTACCAA AGTTGAAGGG
GGGAAAACAT ATCTTTGGCT TCCTATCTAT TGGACCTATA CCTATGCATT AATGCAATTG
CCAGCAAGGG GAAGGCAAAT TGTCTATTGC GACTCAGGGG AGGCGGACGC CGAAGTTCCA
AATTTTCAGA CTGGTAAAAT CACGTGGTCA CCAAATAGAA GCAAATTGGC AGGCTTAACC
ACCAGACAGA GCATGATAAA TAAGACTAGG GATGGTGATT TCGGTGTTTA CTACACCTCC
AACAAAACGA GCTTCGACGG CAAAGGATAC GCCATTCCAT TTATGCCGAT TGAGTTAGCG
TATTGGCTTA TAAAATTAAG AAAATGGCAA GAAAAATACA ACCCCATTGA GAAACCGACT
GAATGGCTAG AATGCACAAG AACTAATTTG AACGAACTTC AAAGGAAACA AAAGGGGAGA
AACTGCTTCT TATTTCGTGA TTTTAAGGAA ATTGAACCCG GTACATTCGG AGGAAGACTA
GCATCTAGAC TTGCTGCGGC GTTATTTTTT TCATCTGACG ACCAGCTAGT TTCTGCTTCC
TACGCCGGAC AAAACCATCA CGAGTGCGCA TCTCAACTTA AGCAACAGCA ATCAATTGCC
CTTTCACCAT TTAAATCAGC CTACACACCA CACTCTATGC GGGTTAGCCT AATTAATGCC
TACGCTTATG AATTTGGCAT GCCCATGGAA GTCATTATGA AGCTGGTTGG TCATTCTTCA
ATCATCATGT CAATTTACTA CATTAAGAGC GATAAAACGG GTGCTAATAT CCGCGAGAAA
GTGACTCTTG GCGAAAAAAA TGCCTTGAAT AAAGCAACAG AGACCCTTAA AAGTTTTATT
GAATCCCAAC GAATTGAAGA ATGTAAAAGC CAGCTCGTCG CTAACAATGC TGAGTTTCTA
TCGACTATCG ACAACACTAG GCCGGCATCG AGTTATCTTT TCAGAGATTT TGGCATATGC
CCAGTTGGCG GGGGATTTTG CAATGAAGGG GGAACTGCTG TCGCGATGAG AGCCAATATT
TACCATCCAG TGACAGCGGG GTATTTAGGG GAGCAAAACT GTATTCAATG CAGGTTTTTT
ATCACTGGCC CAGGGTTTAT GATGGGACTA GTTGCATTGT TCAACGAGAT TAGTTTGGCT
GTGCATACAC AATCGCTACG CTACAGTCTT TTAGGAAATG AGCTAAATGA TACTGCAAAT
AAAATAGATA TACTCTCGCA TAAAATATAT GAACATAAAT TACAAAATAG CCAGACATCT
AATTTGGAAA TTGAAAAACT TAAATTTCAA TCAGAAAGAA GAAAACTGAA CTCAGAGATT
GAAATCAAAG CAAAAAAAAT GGATTTGTAC ATGAGTGATA TGAACGCCCT CCACAAACAC
TTATTTAACT GCCAATCCAT CATTAACCAA GGCTCAGCAT CTGAAGAATC AAAGCTACAA
CTGATAGTCC CTAGAGACTT TTCTGTGAAT TTTGAAATCA ACGAAGTAAG CGCTTTTCAT
CAACTCTCCG AAGTATGTGA AAACGCAGAG CTTTACCATA GCTGCACAGA TGAGCAAGCC
GTAATAAGAA GGAGCCAATC ACTAGATAAG ATGCTGATAA AAAATGGTAT TACCCCCCAT
TTTTTGTATT TAAACGAAAC TGAACAACTC AATGTGGGTA ACCAAATGAC TCAATTGATG
CTCTCAAGGC TAAAAAGCTG GGAAAAAATC GACAGGCTTA TCGATGGTGA TTTGGCTTTA
AATGATTTTG AAGATGGCGA ACGAATTTCT AAGAACGAAT TGAAACAACT ATTTATGGGG
GCGACCCCAC TCAAGCTGGT CGATTAA
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| Protein sequence | MKKCFHATYA KAQQATLALG ITTQRDYKRR YREDPRLPYS PDEIYAADWQ SWPQFLGTAD
KLYPTCADAQ QATLALGITT QRDYKRRFRE DPRLPSSPDR IYAADWQSWP QFLGTAEKFY
PTYADAQQAA QVLGITSREA YLQRYREDPR LPSSPHRTYA ANWQSWPQFL GTADKFYPTY
ADAQKAAQVL GIKSWTEYIQ RYREDPRLPS SPDEIYAADW QSWPQFLGTA DKFYPTYADA
QQAVLGITSR EAYHQRYRED PRLPYSPHRT YAANWQSWPQ FLGTAEKFYP TYADAQQAAQ
ALGITTLRDY KRRYREDPRL PYSPDEIYAA DWQSWPQFLG TADKLYPTCA DAQQATLALG
ITTQRDYKRR FREDPRLPYS PDRIYAADWQ SWPQFLGTAE KFYPTCAEAQ QAAQVLGITS
REAYLQRYRE DPRLPSSPHR TYAANWQSWA QFLQTADKFY PTYAEAQQAT LALGITSRPV
YIQRYREDPR LPSSPDRIYA ADWQSWPQFL GTAEKFYPTD ADAQQAAQVL GITSREAYLQ
RYREDPRLPA TPDKFYAAGW QSWTAFLLPN RIDTLRVLKN ACKVLGIRDS LQYRQIQKDY
AQLPSKPDKK FNDWIDWYDL LDIPKPYELH KLKKIVHSHK CTSLANYKKL RSTLNDPKMP
ASPIDYYKDK GWTNTFDFFG VKRPYQVRYF EPEWKPWGDL ITEFLKTAKG GDTKVKDLCE
FVREYIEPNK FEISPLDYLT RGKTNIQPML ELFELVPITR KKKWLFSINE FLDWLIVKFL
TIEDEDTGEV SRIKGAKNPF SHINFDDEQI PVSLNETNKL ALPYQFVKSA REWIFPQTQF
EKVSYLELLH LHKFQADWVP IDESIEIDPS DPDCVTKVEG GKTYLWLPIY WTYTYALMQL
PARGRQIVYC DSGEADAEVP NFQTGKITWS PNRSKLAGLT TRQSMINKTR DGDFGVYYTS
NKTSFDGKGY AIPFMPIELA YWLIKLRKWQ EKYNPIEKPT EWLECTRTNL NELQRKQKGR
NCFLFRDFKE IEPGTFGGRL ASRLAAALFF SSDDQLVSAS YAGQNHHECA SQLKQQQSIA
LSPFKSAYTP HSMRVSLINA YAYEFGMPME VIMKLVGHSS IIMSIYYIKS DKTGANIREK
VTLGEKNALN KATETLKSFI ESQRIEECKS QLVANNAEFL STIDNTRPAS SYLFRDFGIC
PVGGGFCNEG GTAVAMRANI YHPVTAGYLG EQNCIQCRFF ITGPGFMMGL VALFNEISLA
VHTQSLRYSL LGNELNDTAN KIDILSHKIY EHKLQNSQTS NLEIEKLKFQ SERRKLNSEI
EIKAKKMDLY MSDMNALHKH LFNCQSIINQ GSASEESKLQ LIVPRDFSVN FEINEVSAFH
QLSEVCENAE LYHSCTDEQA VIRRSQSLDK MLIKNGITPH FLYLNETEQL NVGNQMTQLM
LSRLKSWEKI DRLIDGDLAL NDFEDGERIS KNELKQLFMG ATPLKLVD
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