| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3827 |
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| Symbol | |
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| ID | 4256814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4548348 |
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| End bp | 4549805 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124516 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_739861 |
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| Protein GI | 114049311 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.147478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGACAG GGGCTGAGTT ACTGGATAGC GAATTTATCC AAGGGTTTTC GGCCTCTCTC
CTCGATGATT ACCTCAACGC CAAAAACTAT GTGCAGGATG TGCCCACCCA GTCACTGCTA
CATATCCGCA GTTTTACCCA CAGGCTGACC GAACTACTCG GTCAGGATAA AGCCGTCTCC
TTCACCAGTC CCAACCTCTA TGATCGTATC GAGCTGTTAA ACCAAAAGCG GCTGATCGAT
GTGAAGACGA CTAGAGCCTT GCATCGCCTG CGTGGCGATG GTAATCGTGG TGCCCACCCT
GAAAAATACC ATTTAACCCA AGAACAATTG CTCGCCTTGG CCCAAAAGGC CATCAAGGAT
GTGTTGGCCT TAATTGAGCA CTTGTATCCT AAGGTGGTTG GGCGTGCGGC TCCCGCTTAT
CGTTACCAAG CCAGCGATGC AGTTACCATC AAAGATCTCT GTTACCGCGC GGTGATGGAA
GACGACCCTA AGGCCCAATA TTTAGTGGGG ATCTCTTTTA AAACCAAAGC ATTAATGCTT
AAAGAACAAG AGCTTGTCTT GGCTGACCAA TCCTATGGTA ATGAAGATGA AAATGGCCCA
GCGGTAAAGG AAGTGGCGCA AAAAGCCAGT GATACCTTTG CTAAAGCTGC CTATTGGTTT
GCCCTTGCGG CGCCAAAACA TTCGGATGCC CTCTATGAAC ATGGGGTGGG GCTTATCCAT
GGCTATCAAG GACAGGCCGA TGCCATTCAG GGCGAAGCTG CAATTACCAA GGCTGCTCAG
GCGGGCGTTG TCAATGCAAT GGCGTTACTC GGGTATTTTT ATCTGGTGGG CAGTGAGTCA
TTTAAGCCGG ATTTAGTGCA GGCGAAGCAC TATTTGCAAC TGGCGGCCGA GGGCGAGCAG
ACCGAAGCCA TGGCGAATTT AGGCGTGCTT TACTATCAGG CGAAAGATCT GACCCAAGCC
TATCATTTTA TTAATAAAGC GGCGCAAGCG GGTTATCCCC ATGCCCAGTA CCATTTAGCC
TTAATGCTCG CTAATGGCGA TGGTTGTCAG CGCGATCCTA TTGTGAGTGA ATATTGGATG
GCCGAAGCGG CGGAACAAGG CCAACTCGAT GCCATGCTTA CCCGCGCACA ACACATGCTA
AACGATGAAA GTGGTTTGGG TGGCGATGTG AGCCAGGCGG AGCGTTACCT GCGTGAAGTG
ATTAAATACG GTCACAGCGT GCCAGCCATG ATTGAGTTGA GCATGGCACT CGCAGACGGT
ATTTTAGGGC GCATCGATGT GGTGGGCTCT GCGGCGCTGC TCAACCTGGC GCGCCGTCAT
GCTAATGCCA AAGAGGCCGA GATCATCGAA CCTCTCTGGC AATCACTCGC GCTGCAAATT
GATACTGTGC TGGAGATGAC TCAAGATCCC GGCGAGATTC AAACCCTTAA GCGCGCAAAG
ACCTTACTTA GCGCCTAG
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| Protein sequence | MGTGAELLDS EFIQGFSASL LDDYLNAKNY VQDVPTQSLL HIRSFTHRLT ELLGQDKAVS
FTSPNLYDRI ELLNQKRLID VKTTRALHRL RGDGNRGAHP EKYHLTQEQL LALAQKAIKD
VLALIEHLYP KVVGRAAPAY RYQASDAVTI KDLCYRAVME DDPKAQYLVG ISFKTKALML
KEQELVLADQ SYGNEDENGP AVKEVAQKAS DTFAKAAYWF ALAAPKHSDA LYEHGVGLIH
GYQGQADAIQ GEAAITKAAQ AGVVNAMALL GYFYLVGSES FKPDLVQAKH YLQLAAEGEQ
TEAMANLGVL YYQAKDLTQA YHFINKAAQA GYPHAQYHLA LMLANGDGCQ RDPIVSEYWM
AEAAEQGQLD AMLTRAQHML NDESGLGGDV SQAERYLREV IKYGHSVPAM IELSMALADG
ILGRIDVVGS AALLNLARRH ANAKEAEIIE PLWQSLALQI DTVLEMTQDP GEIQTLKRAK
TLLSA
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