Gene Shewmr7_3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3727 
Symbol 
ID4254867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4437166 
End bp4437777 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content51% 
IMG OID638124415 
ProductTetR family transcriptional regulator 
Protein accessionYP_739764 
Protein GI114049214 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000227076 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAGAAA AAGCAGTAAA ACTGACACAT TCCCAACTGA AGCGTTTGGC GATCCTCGAC 
GCGTCACAGG AAGAATTTAT GGTCAATGGT TTTGCCGGCG CCAGCATGGA TAGAATTGCC
CAGCGTGCCA ATGTCTCCAA GCGCACTGTT TACAATCATT TCCCCAGCAA AGAAGTGTTA
TTCGAGGCGA CAACCGGTGA CCTGTGGGCG CGCACTAAAG AAGCGGCCAC CCTAGTATTT
AATCCTGAGC AGAGCCTCGA ATCACAATTG CAACAGATTG CGCGTCGCTG CTGGGAGCTG
TATCAGCAAC CGGATTTCCT GCGAGTGGCA AGGGTAGTGA TGGCCGAATT TATTCGCTCA
CCGGTTCAAG CGACCGAGGC CATGGAAAAA TTAGCCAAAC AAGAAGGCGG ATTAGAGGCT
TGGCTTGCCG GGGCGGTAGC CCATAAGGCG TTAAAGATCG ATAATATTCC ACTGGCGGCA
ACCCAGTTTT GGGGCATGTT TAAGGCCTTC GCTTTTTGGC CGAAATTGTT CCATATGAAG
AATCATGACG AGCAGCGGCA AGAGATCATT GATGCCAACA TCCGTATGTT TCTCGCCATG
TATCGCGCTT AG
 
Protein sequence
MAEKAVKLTH SQLKRLAILD ASQEEFMVNG FAGASMDRIA QRANVSKRTV YNHFPSKEVL 
FEATTGDLWA RTKEAATLVF NPEQSLESQL QQIARRCWEL YQQPDFLRVA RVVMAEFIRS
PVQATEAMEK LAKQEGGLEA WLAGAVAHKA LKIDNIPLAA TQFWGMFKAF AFWPKLFHMK
NHDEQRQEII DANIRMFLAM YRA