Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3727 |
Symbol | |
ID | 4254867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4437166 |
End bp | 4437777 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124415 |
Product | TetR family transcriptional regulator |
Protein accession | YP_739764 |
Protein GI | 114049214 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000227076 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCAGAAA AAGCAGTAAA ACTGACACAT TCCCAACTGA AGCGTTTGGC GATCCTCGAC GCGTCACAGG AAGAATTTAT GGTCAATGGT TTTGCCGGCG CCAGCATGGA TAGAATTGCC CAGCGTGCCA ATGTCTCCAA GCGCACTGTT TACAATCATT TCCCCAGCAA AGAAGTGTTA TTCGAGGCGA CAACCGGTGA CCTGTGGGCG CGCACTAAAG AAGCGGCCAC CCTAGTATTT AATCCTGAGC AGAGCCTCGA ATCACAATTG CAACAGATTG CGCGTCGCTG CTGGGAGCTG TATCAGCAAC CGGATTTCCT GCGAGTGGCA AGGGTAGTGA TGGCCGAATT TATTCGCTCA CCGGTTCAAG CGACCGAGGC CATGGAAAAA TTAGCCAAAC AAGAAGGCGG ATTAGAGGCT TGGCTTGCCG GGGCGGTAGC CCATAAGGCG TTAAAGATCG ATAATATTCC ACTGGCGGCA ACCCAGTTTT GGGGCATGTT TAAGGCCTTC GCTTTTTGGC CGAAATTGTT CCATATGAAG AATCATGACG AGCAGCGGCA AGAGATCATT GATGCCAACA TCCGTATGTT TCTCGCCATG TATCGCGCTT AG
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Protein sequence | MAEKAVKLTH SQLKRLAILD ASQEEFMVNG FAGASMDRIA QRANVSKRTV YNHFPSKEVL FEATTGDLWA RTKEAATLVF NPEQSLESQL QQIARRCWEL YQQPDFLRVA RVVMAEFIRS PVQATEAMEK LAKQEGGLEA WLAGAVAHKA LKIDNIPLAA TQFWGMFKAF AFWPKLFHMK NHDEQRQEII DANIRMFLAM YRA
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