| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3660 |
|---|
| Symbol | |
|---|
| ID | 4256158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4357661 |
|---|
| End bp | 4358794 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638124348 |
|---|
| Product | alanine-glyoxylate aminotransferase |
|---|
| Protein accession | YP_739697 |
|---|
| Protein GI | 114049147 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACCTG CACCGCATTT TTCTGCCTTT AATCCGCCTC GCCGCATTTT GATGGGGCCA
GGTCCATCGG ATGTTTATCC TGAAGTATTA GCCGCACAGG CAAGACCGAC CGTCGGCCAC
CTAGATCCAT TATTTGTTGG CATGATGGAT GAGCTTAAGA GCCTGATCCA ATATGCGTTT
CAAACCAAAA ATGAAATGAC GATGGCAGTG TCGGCCCCCG GCAGTGCAGG CATGGAAACC
TGTTTTGTGA ACTTAGTCGA ACCCGGCGAA AAGGTGATTG TGTGCCGCAA TGGCGTGTTT
GGTGAGCGTA TGCGCCAAAA CGTCGAGCGT GTCGGTGCGA TTGCTGTGGT TGTGGATAAT
GAATGGGGCA CACCCGTCGA CCCTGCTGCC GTTGAAGCGG CGCTTAAGGC CAACCCCGAT
GCTAAATTCC TCGCCTTTGT GCATGCCGAA ACCTCAACAG GCGCATTGAG TGATGCTAAA
ACCCTGTGTG CGCTGGCAAA ACAATATGGC TGTTTATCGA TTGTCGATGC GGTCACATCC
CTCGGCGGCG TGGAATTAAG AGTCGATGAA TGGGGAATCG ATGCCATTTA TTCTGGCAGT
CAGAAATGTC TCTCCTGCGT GCCGGGGTTA TCGCCTGTGT CTTTCTCGCC CGCAGCGGTG
GAGAAGCTTA AAAACCGTAA AACGCTAGTG CAGAGCTGGT TCCTAGATCA AAGTCTGGTC
ATGGCCTATT GGACGAGCGC TGGTGGCAAG CGCAGTTATC ACCATACCGC GCCCGTTAAT
GCGCTTTATG CTCTGCACGA ATCGCTGCGC TTATTGGCCG AAGAAGGTTT AGAACAGGCT
TGGCAACGCC ACAAAGAGAT GCATTTAGTG CTACGCGCAG GCCTTGAAAA ACTTGGCCTG
AAATTTGTGG TCGCCGAAGC TTCGCGCTTG CCGCAGCTAA ATGCCATTTA TATCCCTGAA
GGCGTTGATG ATGCCGCCGT GCGTGCGCGT CTACTCAAGG ATTACAACCT TGAAATTGGT
GCAGGTCTTG GTGCTCTAGC GGGTAAAGCT TGGCGCATCG GTTTAATGGG CTTTGGTGCC
CGTCGTGAGA ATGTCGCGCT CTGTCTGCGC GCCCTAGAAG AGGTGCTGAA CTAA
|
|---|
| Protein sequence | MLPAPHFSAF NPPRRILMGP GPSDVYPEVL AAQARPTVGH LDPLFVGMMD ELKSLIQYAF
QTKNEMTMAV SAPGSAGMET CFVNLVEPGE KVIVCRNGVF GERMRQNVER VGAIAVVVDN
EWGTPVDPAA VEAALKANPD AKFLAFVHAE TSTGALSDAK TLCALAKQYG CLSIVDAVTS
LGGVELRVDE WGIDAIYSGS QKCLSCVPGL SPVSFSPAAV EKLKNRKTLV QSWFLDQSLV
MAYWTSAGGK RSYHHTAPVN ALYALHESLR LLAEEGLEQA WQRHKEMHLV LRAGLEKLGL
KFVVAEASRL PQLNAIYIPE GVDDAAVRAR LLKDYNLEIG AGLGALAGKA WRIGLMGFGA
RRENVALCLR ALEEVLN
|
|---|
| |