| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3392 |
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| Symbol | |
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| ID | 4255006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4019836 |
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| End bp | 4020582 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638124074 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_739431 |
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| Protein GI | 114048881 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTGCAT CGGCAGCCAA TAACATTTAC ATGGTTGAGA TGATGATGTT GAGATCAATT
TCAGGTGTAA TAACCACTTT TCTCCTGGCT GGATTTGTCC CCGCTGCTCT GGGTTTTGGT
GGTATCTCAA TTAATGGTAC CAGATTGATA TATGATGGGA ATAAGTCAGA AGCGCAGCTA
ACTGTTAAAA ATACTGGAAA TTCTCCTTAT CTTATTCAAT CTTGGGTTGA GGAAAATGGG
AATGAGGGGA GTAAGCGAAA TTCTTCTGGT TTTATCATCA CTCCACCACT ATTTCGAATC
GAAGGACATG AAAGACATAT ACTGCGAATT TACAAGTTAA GTGACAATTT TCCCAAGGAT
AGGGAATCGA TTTTTTGGAT AAATATAAAG TCAATTCCCA GAAGTGATAA GTCAGAGTTA
AATTCACTGC AAATTGCCGT GAAAACAAAA ATAAAGTTAA TCTTCCGGCC GGAAAATATT
TCCACACGGC CTGAAGAAGA GGTTGGTAAG ATAATTTGGT CTCGGTCTGA AAATCGACTC
ATTGCTAAAA ATCAGAGCAA TCATGTTATG AACTTATACA AGTTAAAAGT TGGGGAGTCA
GAGCTGAGTG GTGTTGGCTA TCTGTTGCCT TTCGATACCA AAGAGTTCGA GGTGCCAAAA
GATTATTCAG GATTCGTTGA GTTCTCAGTT ATCAATGATC ATGGACAGAC AACCCCCTCA
ATTACAACCA GTCTCGATTG GAAATGA
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| Protein sequence | MAASAANNIY MVEMMMLRSI SGVITTFLLA GFVPAALGFG GISINGTRLI YDGNKSEAQL
TVKNTGNSPY LIQSWVEENG NEGSKRNSSG FIITPPLFRI EGHERHILRI YKLSDNFPKD
RESIFWINIK SIPRSDKSEL NSLQIAVKTK IKLIFRPENI STRPEEEVGK IIWSRSENRL
IAKNQSNHVM NLYKLKVGES ELSGVGYLLP FDTKEFEVPK DYSGFVEFSV INDHGQTTPS
ITTSLDWK
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