Gene Shewmr7_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3388 
Symbol 
ID4255002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4013045 
End bp4014214 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content55% 
IMG OID638124070 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_739427 
Protein GI114048877 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.2674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCT ACAGCCGTGA TTTTTTACTT GCGCACTCCC AAAGTATTCT CGATTTTTAC 
GATCCCAGAG TGCTCGCCCC CAATGGAGGC TATTTTCACA ACTACTATGA TGATGGCACC
CTGTTTGAAC CGGGGTTTCG CCAGCTGGTG AGCAGCTGCC GCATCACAGT CAACTACGCC
CGCGCAGCGG AGGTATTGGA TCAACCTGCA TATTTGCAAA CCGCCAGCCA CGGCTTGAAC
TATCTGCTCA ATGTGCATCT GCAAGCGGAT GAGCGCTTCG CATGGACACT GAGAAATCAT
CAGCCCGAGG ACATGACCCA GCAGGCCTAT GGTTATGCCT TCGTGCTACT CGCCTTCGCC
GCCTGTCGCA AAGCCGGTAT TTTGAAAGAC AACGATAAAC TCCTGTGGGT TTATAAGCTG
CTGGAGCAGC GCTTCTGGCT ACCAGAGTAT GGACTTTATG CCGATGAAAT CAGCGCCGAT
GGGCAGCTTT CGGACTATCG CGGCCAGAAC GCCAACATGC ATCTGTGCGA AGCCATGATT
GCCGCCTTCG AGGCCAGTGG AGACGAGCGC TTCCTCGACC GCGCCATGGA GATTGCTGAC
AAGATTGCCA ACCGTCAGGC ATCGCTTACC GGCGGCATGA TTTGGGAGCA CTTTACCCCC
GAATTCGCCA TCGACTGGGA CTATAACAAG GACGATCCGA AAAACCTCTA TCGCCCCTGG
GGCTTTCAGG GTGGCCACCA AACCGAGTGG GCCAAGCTGT TACTGTCCCT CGCCCGCCAC
AGCCATCAGT CGTGGCTGAT GAGCCGCGCC AAATCCCTGT TCGATACCGC CTTTGAAAAG
AGCTGGGACT CGGAGCATGG CGGTATGGTC TACGGCTTTG GTCCTGATGG CAATTGGTGC
GACGAGGACA AGTACTTCTG GGTGCAGGCC GAGAGCTTTG CCGCTGCCGC CATGCTGTAT
CAGCAAACCG GCGAGCAGCA ATATCTGGAT GCCTATAACG CCCTGTGGGA CTATGCTTGG
CAGCATTTTG TTGATCATAA GCACGGCGCC TGGTTCAGGG TGCTGCACCG CGATAACCGC
AAGTATTCCA ATGAGAAAAG TGCTGCTGGC GCCAAATGTG ACTACCACAC CCTCGGTGCC
TGTTTCGACA CTCTGCGCGA CCTGCGCTAG
 
Protein sequence
MNFYSRDFLL AHSQSILDFY DPRVLAPNGG YFHNYYDDGT LFEPGFRQLV SSCRITVNYA 
RAAEVLDQPA YLQTASHGLN YLLNVHLQAD ERFAWTLRNH QPEDMTQQAY GYAFVLLAFA
ACRKAGILKD NDKLLWVYKL LEQRFWLPEY GLYADEISAD GQLSDYRGQN ANMHLCEAMI
AAFEASGDER FLDRAMEIAD KIANRQASLT GGMIWEHFTP EFAIDWDYNK DDPKNLYRPW
GFQGGHQTEW AKLLLSLARH SHQSWLMSRA KSLFDTAFEK SWDSEHGGMV YGFGPDGNWC
DEDKYFWVQA ESFAAAAMLY QQTGEQQYLD AYNALWDYAW QHFVDHKHGA WFRVLHRDNR
KYSNEKSAAG AKCDYHTLGA CFDTLRDLR