Gene Shewmr7_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3379 
Symbol 
ID4257470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3997506 
End bp3998414 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content50% 
IMG OID638124061 
Producthypothetical protein 
Protein accessionYP_739418 
Protein GI114048868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000346578 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTCGCC TAGGTAAGCA GCAGTTGCAA CTCTTGGAGG GCGTTTACCT CAACCGCTCT 
CCAAGGGTGA AACTCAGCCC GAATTGGCGG ACGATTTACC GCGAGTTAGA AGTGGGCGAG
CTGGATGGCG CGGAAAAATA TTTGTGCTTT GCGCCGCGGG ATTTTGAGTT GCTGCGCCAG
GGCGTGTTAG CAAAAGAGGG CGTCGATTTA CAGGCTCTGG ACTTTAATCT AGACCGTATC
GCCATGTCCG CCCAAAGCCA AAATGAAAAG CTGGCGAGTA TCCGCCCAGA AGCCGAGTAT
GTTTTGTTGA AGTATCTCGG TTTTGAATCG CCTCCTATGG GAATGTCTAC GCGTTCTTCG
TTACGCACTC CCTTAGATGA AGCAGAGCAG CTTTGCCATG ATCTTTATGT TAAAGCCATC
TTAGTGATTG AAAACCTAGA TATATTCGAT GCAATAACTC AAGCGCGCTT ACCGGCCGAA
CTTAGCCGCA TTATGGTGAT TTACCGTGGT AGTGGCCACC ATTCCCCCAT TGGTGTGCGG
CATTTTTTGC AGGCAATGGC GGGTAAAATG CCGATCATTG CCTTTACCGA TCTCGATCCC
GCAGGGCTGC AAATTGCCCA TACCTTAACG GGCATGACCC ATTGTATCGT GCCGCAGTTA
GCGCTTGTCG CGCCCAGCGA GTTACTCGCT ATCCCACAGA TTAATTCCGC TGATGACTTT
GCCAAGCAAG CGCCTCAGGC CAAATATTTA CAGTCAGCCG ACTTAAAAAA TTGGCAGCAA
TTGAGTCTTT GGTTAATTCA GCAACGCATT AGCATTAAAC AGCAGCACCT GCTAGTGCAT
CGGCTTGAGC TAGTGCTACT GGCATATGAT GAGTCGTTAT CCATCCCCAT CTATCTGCAA
ATACCTTAA
 
Protein sequence
MARLGKQQLQ LLEGVYLNRS PRVKLSPNWR TIYRELEVGE LDGAEKYLCF APRDFELLRQ 
GVLAKEGVDL QALDFNLDRI AMSAQSQNEK LASIRPEAEY VLLKYLGFES PPMGMSTRSS
LRTPLDEAEQ LCHDLYVKAI LVIENLDIFD AITQARLPAE LSRIMVIYRG SGHHSPIGVR
HFLQAMAGKM PIIAFTDLDP AGLQIAHTLT GMTHCIVPQL ALVAPSELLA IPQINSADDF
AKQAPQAKYL QSADLKNWQQ LSLWLIQQRI SIKQQHLLVH RLELVLLAYD ESLSIPIYLQ
IP