Gene Shewmr7_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3334 
Symbol 
ID4255747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3949533 
End bp3950927 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content51% 
IMG OID638124016 
Productalkaline phosphatase 
Protein accessionYP_739373 
Protein GI114048823 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1785] Alkaline phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.460032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.338767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCA CCAAAGCGCC ACTGTTATTG CTTGGTATGA GTTTATGGCT CTCCACCTCC 
GCACTGGCAG TCGAAGCAGG AGCGAATGAG ACTGGCCCAG TAAAAGCCCC CTCACGCCCG
AAAAATATTG TGATCATGAT TGGCGACGGC ATGGGGCCTT CCTATACCAG TGCCTATCGT
TATTACAAGG ACAATCCAGA TACCGAAGAA GTCGAACAAA CCGTTTTCGA CCGTTTATTG
GTTGGCATGG CGAGCACTTA TCCCGCCAGC GTCAGTGGTT ATGTGACCGA CTCAGCCGCC
GCCGCGACTG CCCTCGCGAC AGGAGTCAAA TCCTATAACG GCGCCATTTC GGTCGATACC
CAAAAACAAC CACTGCCTAC CATTTTTGAA AAGGCCAAAA CCTTAGGCTT GAGCACGGGT
GTGGCGGTCA CGTCGCAAAT CAACCATGCC ACGCCAGCGG CCTTTTTATC CCATAACGAG
AGCCGTAAAA ACTACGACGC ACTGGCATTA AGTTATCTTG AAACCAACGC CGATGTGTTT
TTAGGTGGCG GGCAAAAGTA CTTTCCTCCA GAGCTGTTAG CCCAGTTCAC CGCCAAGGGT
TATCAACACA TTACCCGCTT TGACGATCTG GCCAGCATTA CCCAGCCTAA GGTCTTGGGT
CTGTTTGCCG AGGTGCAACT GCCTTGGGCG ATTGATGAAA AAGATGCTAA AAAACTCAGC
ACCTTGACTC AAAAAGCCCT CAGTTTACTG TCGCAAAATG AGCAAGGCTT TGTGCTGCTG
GTCGAAGGTA GCCTTATCGA CTGGGCGGGA CACAACAATG ATATCGCCGC CGCCATGGGC
GAAATGGATG AATTTGCCAA TGCGATTGAA GTCGTCGAAC AATTCGTACG CCAAAACCCC
GATACCTTAA TGGTGATCAC CGCCGACCAT AATACTGGCG GGTTATCGAT TGGCGCCGAT
GGCAACTACA ACTGGAATCC AGAGATCCTA CGTAATATCT CGGCAAGCTC AGATACCTTA
GCCCAAGCCG CCCTTGGTGG TGACACTTGG CAAGCCGACC TATCCCGCGG GCTAGGCTTT
GAATTGACCG AAGAAGAAGT GACTAAGTTA AATGTTGCCA GAATGCAGGG CCTAGAAACC
ATGGCCGTTG CAATTCGCCA TGTGATTGAT AAGCGTACCG ATACAGGTTG GACTACCGGC
GGCCACACGG GAACTGATGT GCAAGTCTTT GCCGCAGGCC CAGCCTCTGA GTTGTTTAAC
GGTCATCAAG ACAACACAGA TATCGCCAAT AAGATTTTTA GCCTGTTACC TAAGCCTAAA
AAACCAAAAG CCACCGCACA GGTATCGACT CCAGCGCCAG CACCAGAACT AGCACCAGTG
CAGTCTCAGG GCTAA
 
Protein sequence
MSFTKAPLLL LGMSLWLSTS ALAVEAGANE TGPVKAPSRP KNIVIMIGDG MGPSYTSAYR 
YYKDNPDTEE VEQTVFDRLL VGMASTYPAS VSGYVTDSAA AATALATGVK SYNGAISVDT
QKQPLPTIFE KAKTLGLSTG VAVTSQINHA TPAAFLSHNE SRKNYDALAL SYLETNADVF
LGGGQKYFPP ELLAQFTAKG YQHITRFDDL ASITQPKVLG LFAEVQLPWA IDEKDAKKLS
TLTQKALSLL SQNEQGFVLL VEGSLIDWAG HNNDIAAAMG EMDEFANAIE VVEQFVRQNP
DTLMVITADH NTGGLSIGAD GNYNWNPEIL RNISASSDTL AQAALGGDTW QADLSRGLGF
ELTEEEVTKL NVARMQGLET MAVAIRHVID KRTDTGWTTG GHTGTDVQVF AAGPASELFN
GHQDNTDIAN KIFSLLPKPK KPKATAQVST PAPAPELAPV QSQG