| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3256 |
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| Symbol | |
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| ID | 4256948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3859109 |
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| End bp | 3860122 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123939 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_739296 |
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| Protein GI | 114048746 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCCG AAACCATCAA CCCCAATGTC AGCCTACTCG ATAGCGATCA CCAACAGGTC
AATCTCGGTC GCTGGATGCA CCAATGCGAG TTGATTAAAA GCTACTACAG CGCCAGCAGT
GTATTTGTGC TGCAAATGAC TCAGTCTGGG TTTGAAGTAA TTGTCAGCTC GGTGAGTGAG
ACGCCACTGT TTACCTCAGG CACTTTGTTT GCGAACGATT TCCCCCTGTT TGAACAACTA
AAGCATAGCC CTGCCGAGGG AGACTATCTT AATCTCGGCC GTTTTATGCT CGATGAATTA
CCACGGGATT TTGATGGTAT TCAACATATT CTCTCCCGCC CTATCGCTTG GCCCGACGGC
AGTCAATTTG GTTCGCTGTG CGTGTTAAAT CCCCATATGG TCGATCCCTT AAACAACAGC
GCCATGCTGG AGCCCTTCCA AATTCTGCTG CAGCAGGAAT TGTCCCTGCT ATGTCAAAAC
CATCGAATCG AATCGCTGTC GATGCGCGAT CAAGAAACCG GCATGCTCAA CCATTATGGC
TTTATGATGA TGGCGCCAAG ACAGCTCAAT CTCGGCCGCC GTTTTGGCGC CCATGCGGGG
ATTCTTTTTT TCGAGTTGAT TGAGGCAGAC ACCTCAGAAA ACAGCTTAGA AGAGAAACAC
CACAGGCTGC TGGGCAATTT GGTCCAAGAT ACCATTCGCA CCGCCGATGT GGCCGCCCAT
TACAGTGCAA CTCAGTTTGT GGTGTTAGCC TTTGTTGATA GTGAGCGCGA TATATTGCAC
ATTATGAAAC GGGTCGAAAA ACAATTAGAG CAGCAAAATC ACCATCTCAA GCTCGATGCC
AGTTACAGCT TTTTTACCCC CGAATCGACG GCCAAGTTAG CGCCCATGAT GGAGGACGCG
CGCAGCAAAC TCAAATCCAT GCAGCCCGAG CCTGAACCAA CACCTGCGAA TCAAGCGCCC
AAGTTCGATG CCAAACTGTA CGATAATCCC GCCGCCGACT CGGCCGAACT TTAG
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| Protein sequence | MLPETINPNV SLLDSDHQQV NLGRWMHQCE LIKSYYSASS VFVLQMTQSG FEVIVSSVSE
TPLFTSGTLF ANDFPLFEQL KHSPAEGDYL NLGRFMLDEL PRDFDGIQHI LSRPIAWPDG
SQFGSLCVLN PHMVDPLNNS AMLEPFQILL QQELSLLCQN HRIESLSMRD QETGMLNHYG
FMMMAPRQLN LGRRFGAHAG ILFFELIEAD TSENSLEEKH HRLLGNLVQD TIRTADVAAH
YSATQFVVLA FVDSERDILH IMKRVEKQLE QQNHHLKLDA SYSFFTPEST AKLAPMMEDA
RSKLKSMQPE PEPTPANQAP KFDAKLYDNP AADSAEL
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