| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3025 |
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| Symbol | |
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| ID | 4257575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3588652 |
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| End bp | 3589668 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638123703 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_739066 |
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| Protein GI | 114048516 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.824077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA CTATCAACGA CGTCGCTAAA TATGCTGGAG TGTCAATCAA GACAGTTTCC
CGCGTAACCA ATAACGAACC TTCGGTAAAA CAAGCCACGG TTGATAAAGT GAATGAGGCC
ATCAAGGCAT TAAACTACCA GCCCAATCTC GCGGCTAGGA ACCTTGCCGG CACAAAATCC
TATGCCATTG GTTTTATTTA TGATAATCCC AACGCTTATT ACATTATTGA TATGCAAAAC
GGGATTTTGT CGGCCTGTAA AGATAAAGGC TATGAGCTGG TTATTCATCC TTGTAACGCC
AAATCTGACA CCATTTGCGA TGAACTGACT CAACTCGTGA AACATTCGCG GCTGGCAGGT
TTAGTATTAA CACCGCCCCT TTCTGAAGAT CCTAAAGTTC TTAAAGCCTT AAGTGATATT
GACGCCAACT ATGTGCGCAT TATTGCCGGC GAAGGTGATA AAGAGCAGGA TGGACTGACG
ATTTTAGTCA ATGACAAATT TGGTGCAGTT GAAATTACTC AGCATTTGAT CGACTTAGGC
CATAAAGAAA TTGCCTTTTT AAGTGGCGAT CTACACCACG AGTCTACCAA AGAGCGGTTA
CTTGGTTATA AACAAGCATT AACAAAAAAT CGCCTGCTTC TGAATGAAGA TTACATAATT
GAAGGAAAGT ACTCATTTGA GTCGGGCGTT GAAGGAGCTA ACACGCTGTT CAAACAGAAG
AACCGTCCAA CAGCGATTGT TGCCTGTAAC GACGAAATTG CAGCAGGGGC ACTTTTTGCA
GCTCGTTTAG CAGGGTTAGA TATCCCAGGC GATCTATCCA TTGTCGGCTT CGAAGACAGT
CCATTCTCAC GCCAAACCTG GCCAAAACTA ACAACAGTGC ATCAACCTAA CGCTGAAATT
GCCCAAGTGG CAACAGAGCT GTTAATCGCG AAACGCCGTG AACAAGATGC CAAGTTTGCA
AAAACATTTA CGCCAGAGCC TGTGATCCGA GACTCTTCAG CCTCTCCCAA ACATTAA
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| Protein sequence | MKVTINDVAK YAGVSIKTVS RVTNNEPSVK QATVDKVNEA IKALNYQPNL AARNLAGTKS
YAIGFIYDNP NAYYIIDMQN GILSACKDKG YELVIHPCNA KSDTICDELT QLVKHSRLAG
LVLTPPLSED PKVLKALSDI DANYVRIIAG EGDKEQDGLT ILVNDKFGAV EITQHLIDLG
HKEIAFLSGD LHHESTKERL LGYKQALTKN RLLLNEDYII EGKYSFESGV EGANTLFKQK
NRPTAIVACN DEIAAGALFA ARLAGLDIPG DLSIVGFEDS PFSRQTWPKL TTVHQPNAEI
AQVATELLIA KRREQDAKFA KTFTPEPVIR DSSASPKH
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