| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2830 |
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| Symbol | |
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| ID | 4255875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3351722 |
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| End bp | 3353107 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638123507 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_738871 |
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| Protein GI | 114048321 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG ACACACTCGG CTTATCTTCC CCCATTTTGA ATGCGATAGC TGAGTGTGGC
TATCAGCAAC TCACGCAAGT GCAGCAGCAA GTGATCCCCT TAGCTCTCGA GGGAAAAGAC
ATTATGGCCT GTGCCCAAAC GGGAACGGGT AAAACCGCTT CTTTTGCCTT ACCCGTACTC
GAGCAACTGT CAAAGCAGCC TAGCGATAAA CCCTTGTTGC GTGCCTTAGT GATGACGCCT
ACTCGTGAAC TGGCGATTCA AGTGTGCGCT AATATTCAAA AATATAGTCA GTTCCTCCCC
CTGAAAACCT TAGCCGTTTA TGGCGGCGCG AATATGAATC CCCAGCGTAA AGGGGTGGAG
CAGGGCGTTG ATATCCTCGT CGCGACACCG GGACGACTCT TCGACATTAT TGGTCAGTTC
AATTTAGATC TGTCCACAGT GACCACCTTA GTGATCGACG AAGCGGATCG CATGCTCGAT
TTAGGCTTTG TGCGCGACAT TGAAAAGGTG AAGCGTCTTA TTGCGACGGA ACATCAAACC
ATGTTGTTTT CAGCCACCTA TAGCGATGCG GTCAAGCAAC TTTCCCATAA GATGCTCAAT
CAACCCGAGT GGGTTAACGT GGCCGAAAAT GCCACAGCAT CCACCGTTGA GCAGTTGGTC
TATCGAGTCG ATAAACGCCG CAAAGCCGAG TTATTGTCCG AGTTAGTGGG GCGCAACAAT
TGGCGTCAGG TGCTGGTGTT TGCCAGCACT AAGGAATGCG CCGAACATCT ATTGCAGGAA
CTCACCCTCG ATGGGATCAG TGCGGGCGTG TTCCACGGCG ATAAAACCCA AGGCGCGCGT
AATCGCGTGC TCGATGATTT TAAAGCGGGC AAATTGCGAG TGCTGGTGGC GACCGATGTG
GCGGCGCGCG GCTTAGATAT TCAGGCGCTG CCCTTAGTGA TTAACCTCGA ATTGCCATTC
CTTGCGGAAG ACTATGTTCA CCGTATTGGC CGTACTGGCC GCGCGGGACT CTCGGGCCGC
GCGATTTCAT TTGTGTCCCC CGCCGATGAT GAGATGCTGG CCGAGATTGA AGCCTTAATC
GGGCAAACTT TGCCGGTCAC AGTGCAGCCT GGTTATGAAG AAGGCACGCC GCTGCCTGCT
CGTTACCGTG AGGCGCCGAC GGCAACCACT AAGACCGCTA AGTGGAATTA CAAGAGCAGT
CGCAATACGG GGGCTAAAGG CGCGGGCGGC AATGGCACTA AAGCTAATGG CGCGCGGGGC
AAGAGCGGCT TTGGCGGCAA CGCCGGATTC GGTCAATCGA GCGAAAGCCA AGCGCGGGCG
CGTAAATTGC CAGCCCGTGA AGGTAAATAT GCTAAAAATA AGCCGAATAC TCAAAAGGGT
AAATAA
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| Protein sequence | MKFDTLGLSS PILNAIAECG YQQLTQVQQQ VIPLALEGKD IMACAQTGTG KTASFALPVL
EQLSKQPSDK PLLRALVMTP TRELAIQVCA NIQKYSQFLP LKTLAVYGGA NMNPQRKGVE
QGVDILVATP GRLFDIIGQF NLDLSTVTTL VIDEADRMLD LGFVRDIEKV KRLIATEHQT
MLFSATYSDA VKQLSHKMLN QPEWVNVAEN ATASTVEQLV YRVDKRRKAE LLSELVGRNN
WRQVLVFAST KECAEHLLQE LTLDGISAGV FHGDKTQGAR NRVLDDFKAG KLRVLVATDV
AARGLDIQAL PLVINLELPF LAEDYVHRIG RTGRAGLSGR AISFVSPADD EMLAEIEALI
GQTLPVTVQP GYEEGTPLPA RYREAPTATT KTAKWNYKSS RNTGAKGAGG NGTKANGARG
KSGFGGNAGF GQSSESQARA RKLPAREGKY AKNKPNTQKG K
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