Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2828 |
Symbol | |
ID | 4255873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3349640 |
End bp | 3350416 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123505 |
Product | extracellular solute-binding protein |
Protein accession | YP_738869 |
Protein GI | 114048319 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTA AAAAAGTGCT TATTTGTTAC AGCCTTTTTA TCCTCATGAG CCTCTGCCCT TCGGCGAAGG CAGAGGAACT GCTTGCTGTA GGCACTACTT TTAGCCAGAT TTTTGAACAA AAGGCCAATG GGGAATACAG CGGTTTAGGT GTGGATATTC TGAATCGTTT TGCCGAACAG CAAAAAGTAA CCATTCACTA TCAAATCGCG CCCTGGCGCC GCGCACAATC TATGGTCGAA CGAGGGCAAG CGGATATCCT GATTGGCCCC TATATTTCCG AGGCCCGGCA AAAGGTCTTG GCCTTTTCGT CCATCGCCTT TTACCGCGAT GACATTGTCT TTTATGCCAG AACCAACAAT CCCACGCCTT GGGATGGCAA CTATGCCAGC ATCCATGGAC TACGAATTGG TAAGGTACAA GGATGGAGCT ATGGTTATCT GTTTAACGAA CGCACAAAAA CATTCACTAT CAATGAATTT ACCGATCTAA AGAGTGGTAT AGAGCGCCTA TCCCGTGGCG ATCTCGACCT ACTCGCCAGC AATGTTCGTA ACACTCAAGC GGTGCTTGCT CAAATCAAGA TCCCACAGGC CATAGCACCA ATTTTACCAA CAATTGATAC CCTAGATGGT TTTATGGCTT TTCCCAAATA CTCACAATTT CAACCGCTTC AGGAAAGTTT TGACCTCTTT CTACAGGACA TGGTCAAGAC GGGAGAACTG GCAAACCTGG CCAGAGTCCA CGGGGTATCG ATTCCCGACA CTCAGCTCAC CAACTAA
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Protein sequence | MAFKKVLICY SLFILMSLCP SAKAEELLAV GTTFSQIFEQ KANGEYSGLG VDILNRFAEQ QKVTIHYQIA PWRRAQSMVE RGQADILIGP YISEARQKVL AFSSIAFYRD DIVFYARTNN PTPWDGNYAS IHGLRIGKVQ GWSYGYLFNE RTKTFTINEF TDLKSGIERL SRGDLDLLAS NVRNTQAVLA QIKIPQAIAP ILPTIDTLDG FMAFPKYSQF QPLQESFDLF LQDMVKTGEL ANLARVHGVS IPDTQLTN
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