Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2741 |
Symbol | |
ID | 4258741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3248039 |
End bp | 3249736 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123419 |
Product | hypothetical protein |
Protein accession | YP_738783 |
Protein GI | 114048233 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGTA GGATCCACAT TAAGTATTTC TACCTGTTCG GAGCGCTGTT ATTTGGCTAT TTCGCCGTAA CGGGGCACTC CCCTATCCTC ACCTTTATTT GGGCATGGAG CAGCCTATCC CTCGCCCTTG TCGGCTCTGC CTATTGGTTT AATCTCGCCA GTATTTTTAG AAAACGTCAG GATGGTTCCA TCCCTTGGTA TATTCGTTGG GGCTTTATTC CATTTTTATT AGGATGCCGA CTCTATAATC TCTGGGCACG GCACCGTGAT AGCGTGCCTT CTATGCAAGC CATTGATAAA TATCTGTACT TGGGTAGCCG CTTAAGCGCT GCCGATTTAC CTAAACTGAA TCGTTATGGC ATTACCGCTA TTTTAGATGT CACCGCCGAA TTCGACGGCC TCGATGTGTC CCTGTATGAG GATCATATCG ACTATCTGAA TATCCCTATT CTTGACCACA GTGTGCCAAC TAGCGCCCAA TTAAATCAGG CGATTAACTG GTTACACCGT CAAGTACGCG CCCAAAAGCG GGTATTAATC CACTGCGCGC TCGGCCGCGG GCGCTCCGTA ATGGTGCTGG CCGCTTATCT TGTATGCCGC CACCCCGAGC TCAGCTTCGC CGAGGTACTG CAACAGATTA AAAGCATTCG TAAAACCGCA GGCTTAAATC GCTGGCAACT TAAAGCGCTG GAGCAGATGT ACACTCAAGG GGAAATCAAA CTGCATAAGC GAGCCTGGAT TATCGCCAAT CCCGTCTCTG GCGCGGGTAA ATGGCAAAGC CATGGCGAAC AAATTTGCAC TGAACTGAAA CGCTATTTTG AGGTGCAGTT AGCACTCACC ACACCTGAGA TTAGCGCCCA AACCCAAGCC AAAAAAGCAC GGCTTCAGGG CGCCGATATC ATCATCGCTT GCGGGGGCGA TGGCACAGTC ACTGAGGTCG CGGCGGAGAT TATCGACACC GATATCACCT TAGGCATTAT CCCGCTAGGC ACCACCAATG CCCTGTCACA CGCCCTCTTT GGTTTAAGCA GTAAGCTCTA TGCCGTCTCC CAAGCCCTTG ATAATATTAT CCAAGGCCAG ACACAGACCA TAGACACGGC GCGTTGCAAT GAGCGACTGG TGTTACTGCT GGTCGGCATT GGGTTTGAGC AGCAAATGAT TGAGTCGGCG AGCCGCGAGC GTAAAAATGC CCTCGGCCAA CTCGCCTACC TAGATGGTTT GTGGCGCGCG GTGAACACCG ACACCAACCT CGAGTTGCAG CTGACTTTAG ATGACCAAAC CCCAATGACA GTGCAAACCC ACAGCCTAGT GGTTGCCAAT GCCGCACCTT TTACCAGCTT ACTCGCCCAA GGTAAGGGCG AACCCAATAT GACCGACGGC TTGTTGGATA TCACTTGGTT AGATTCAAAT AATGAGCCGA ATGAACAACT TATCAGTCTG GTTGAACTGG CTTTTACTGG CTGGATTAAA GAGGCCGCCA ATAGCGACTC TGCGGCCACG GGCAACACGG GTAAAGTGAA ACATGCCCAC GCGAAAAAGG TGAAGATCAG CAGTCAGCCC CAATGCAAGT ATGTGATTGA TGGCGAGATT TGTGAGCCGG AGGAACTCAA TATCGATATC CTGCCCGCCT CTTTGAAGGT GTTTGTGCCC TATCAAGCGC AAAATGCTGA ACCGCAGTCA GAATCAAAAA TAAGCTAA
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Protein sequence | MLSRIHIKYF YLFGALLFGY FAVTGHSPIL TFIWAWSSLS LALVGSAYWF NLASIFRKRQ DGSIPWYIRW GFIPFLLGCR LYNLWARHRD SVPSMQAIDK YLYLGSRLSA ADLPKLNRYG ITAILDVTAE FDGLDVSLYE DHIDYLNIPI LDHSVPTSAQ LNQAINWLHR QVRAQKRVLI HCALGRGRSV MVLAAYLVCR HPELSFAEVL QQIKSIRKTA GLNRWQLKAL EQMYTQGEIK LHKRAWIIAN PVSGAGKWQS HGEQICTELK RYFEVQLALT TPEISAQTQA KKARLQGADI IIACGGDGTV TEVAAEIIDT DITLGIIPLG TTNALSHALF GLSSKLYAVS QALDNIIQGQ TQTIDTARCN ERLVLLLVGI GFEQQMIESA SRERKNALGQ LAYLDGLWRA VNTDTNLELQ LTLDDQTPMT VQTHSLVVAN AAPFTSLLAQ GKGEPNMTDG LLDITWLDSN NEPNEQLISL VELAFTGWIK EAANSDSAAT GNTGKVKHAH AKKVKISSQP QCKYVIDGEI CEPEELNIDI LPASLKVFVP YQAQNAEPQS ESKIS
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