Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2602 |
Symbol | |
ID | 4257484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3075641 |
End bp | 3077011 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638123280 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_738644 |
Protein GI | 114048094 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.434411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGGTT TTGATCGTCG TTCGTTTTTA AAGGCTTCTA TGGTAACCGC TGCGGCAACG GCCCTTGCGG CCTGTGCCAG CAGTGAACGT GCTACAGGCA CAACACCTAA GGCTGCGGGT AAATCTGTGA TGGGACTGGT CGTGCCCAAG ATGGATGAGG TTCGAGTGGG GTTAATCGGG GTGGGTGAGC GCGGCATTGG GTTTGTGCAT CATTTCAGCC GTATTGAAGG TGCCCGCATT ACCGCCATCT GTGATACCGA TACCTTAGTG CTGGCCCGCG CTGAAAAAGC CATTAACGAA TATGGACGTG ATAAACCTGC CTATTTTAGC AAGGGCGACC ATGCGTACCG CGATCTGTTA AACCGTGATG ATGTGGATAT CGTCGTGATT GCCACACCGT GGGCTTGGCA TCACCCCATG GCGAAAGAAG CCATGTTAGC GGGCAAGCAT GCCTTCGTCG AAGTCCCGAT GGCGGGCACG ATTGAAGAGC TGTGGGATCT GGTGGATACC GCCGAACTGA CCCAGCGTAA CTGCATGATG ATGGAAAACG TCTGTTACGG CCGTGATGAG TTGATGGTGC TCAACATGGT GCGCCAAGGC CTGTTTGGTG AACTGCTCCA CGGTGAAGCG GCCTACATCC ACGAACTGCG CTGGCAGATG AAGGAAATCG ACCGTAAAAC AGGCTCTTGG CGTACGGCTT ACCATGCTAA ATACAACGGC AACCTCTATC CCACCCATGG TTTAGGCCCT GTTGCCCAGT ATATGAATAT CAACCGCGGC GACCGTTTAG ACTATTTAAC CTCTGTGAGC TCTCCTTCCT TAGGCCGCGC CGCCTATGCC AAACGTGAGT TCCCAGCGGA TCATCAGCGT AACCAGTTGA AATATATCGG TGGCGATATG AATACCAGTC TGATCAAGAC TGTGAAGGGC CGCAGCATTA TGGTGCAGCA TGATACGACC ACGCCTCGTC CTTACAGCCG CCATAACCTG ATCCAAGGGA CAAACGGCGT GTTTGCTGGC TTCCCTAATC GTATCGCGCT GGAAAACGGT GGCTCTGGCA GTTATCACGA GTGGGATGAA AACATGGACG CTTGGTACGC CAAATATGAT CACCCTCTGT GGACCCGTAT GGGCAAAGAG GCGGAGGAGA ATGGCGGCCA CGGTGGCATG GACTTCTTGA TGTGCTGGCG GATGATTTAC TGCTTACGCA ATGGCGAGGC ACTGGATCAG GATGTGTACG ACGGCGCGGC ATGGTCGGCG GTATTCCCCT TGTCGGTGGC CTCAGTCGGT GACCGGGGTA ACTCCAAGGA CTTCCCAGAC TTTACCCGTG GCGTCTGGCA AACCGCGAAA CCCCTCGGCA TTGTGGGGTA A
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Protein sequence | MSGFDRRSFL KASMVTAAAT ALAACASSER ATGTTPKAAG KSVMGLVVPK MDEVRVGLIG VGERGIGFVH HFSRIEGARI TAICDTDTLV LARAEKAINE YGRDKPAYFS KGDHAYRDLL NRDDVDIVVI ATPWAWHHPM AKEAMLAGKH AFVEVPMAGT IEELWDLVDT AELTQRNCMM MENVCYGRDE LMVLNMVRQG LFGELLHGEA AYIHELRWQM KEIDRKTGSW RTAYHAKYNG NLYPTHGLGP VAQYMNINRG DRLDYLTSVS SPSLGRAAYA KREFPADHQR NQLKYIGGDM NTSLIKTVKG RSIMVQHDTT TPRPYSRHNL IQGTNGVFAG FPNRIALENG GSGSYHEWDE NMDAWYAKYD HPLWTRMGKE AEENGGHGGM DFLMCWRMIY CLRNGEALDQ DVYDGAAWSA VFPLSVASVG DRGNSKDFPD FTRGVWQTAK PLGIVG
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