Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2577 |
Symbol | |
ID | 4256659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3044885 |
End bp | 3047080 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123255 |
Product | decaheme cytochrome c |
Protein accession | YP_738619 |
Protein GI | 114048069 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00883016 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00925289 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATGAAAC GGTTCAATTT CAATACCGCA ACAAAAGCGA TGTTGGGTGC CGGTTTACTT TCACTTCTTC TCACTGGTTG TGGTGGCAGT GATGGTAAAG ATGGTGAAGA CGGTAAACCA GGCGTTGTTG GTGTTAATAT CGACTCAACC TCAACGTTAC AAGCGAAATT CACAAATGCC ACTGTTGATG CTGGCAAAGT CACCGTTGAT TTTACATTGG AAAATGCCAA TGGTGTGGCC GTACTCGGCT TAACGAAAGA TCACGATTTA CGATTCGGAA TTGCTCAGCT CACCCATGTG ACTGAAGCAA CGGACGATCC AGCTAAACCA GCGGATCGCG GCTATCAATG GCAAGCCTAT ATCAATGCCA AAAAAGAGCC AGGTACAGTT CCATCAGGTG TCGATAACCT AAATCCATCG GCCCAATACC AAGCCAACGT GGAAGCGGCA AATAAATGCG ACACTTGCTT AGTTGACCAC GGTGACGGTA GCTATAGCTA CACCTATCAG GCCAACATTG CCAATGTAAC TGAGCCACTC ACAGTCACTT ACAGTGCCGA TGCGACTCAA CGCGCCACAA TGGAGCTGGA TTTACCACAG GTTGTGGCCA ACGCCCATTT CGATTGGCAA CCCTCTACAG GTAAGACGGA AGGCATTCAA ACCCGCAATG TGGTTTCTAT TCAAGCCTGT TATACCTGTC ACCAACCAGA AAGCTTAGAG CTGCATGGTG GTCGTCGTAT TGATCTTGAA AACTGTGCTT CTTGCCATAC TGCAACCTCT GGTGACCCAG AGTCAGGCAA TAGCATTGAA TTCACTTACA TGATCCATGC TATCCACAAA GGCGCTGAAC GCCATACCTT CGATGAAACT GGCGCAGAAG TACCAGCACC TTACAAGATT GTCGGTTACG GTGGTTCATT ACACGACTAC GGCAAAGTAA CTTTCCCATT AAAACCTGCC GCGGACTGTT CTGCATGTCA CGTTGAAGGT GCGGGAGCGC CTGCGAATGC CGACCTCTTC AAAGCAGATT CAAGCAATCA AGCTTGTATT GCTTGTCACA CCGAAAAACC ATCTTCACAC CACAGCAGCA CAGATTGTAT GTCTTGCCAC AATGCGACCG AGCCTTACGG CGGTACTGGC AGTGCGGCTA AACGCCATGG TGATGTACTG AAAGCCTATT CTGATACTCA AGCAATGGGC ATTAAGTTCA GCAATGTGGG AGTGAATGAC ACTGGTAAGA TTACCTTTGA TGTTCAAGTC GTTGATAAAG ATGGCAATGC TATCGATAAA AAATATGTAA ACCAAGGCTC ACGCGTTGTT GTGGCATGGG ATTCTAATAA AGATTACCCA AGCTATGCAG ATGCCTCTTA CAGCAACCGT CGTATCGCAC TGAACGAAGG CACTTACAAT GAAACGACCA AAACCTACAC GTTAACTGGC ACTAAGTTCA GCCTGCCAGC GGATGCTAAC GGTAAAACCT TTGAACTCTG GTCAGCATTA GAAGTGTGTT TCAACAACGG TGGTTACGGT GTTGCCGAAA TCGTTACAAC CGATTGTAGT GCTGAGAACG TACGTAAAGT GCCCGTAAAA GAAGCCCCTT ACCACTTCGT TTGGAAAGAC AATGGTGTAG ATAGCGCTAC CTCTCCAGCT AGCCGTCGCC CTATTGTTGA CACATCGAAT TGTCAAGGCT GCCATAATCA ACAAGTTCTG CATTACGATA ACGGTGTAAA CTGCCAGACT TGTCATACCC CAGACAAGGC GCTTAAAGAG ACTGTACGCA ATTCAGGTAA GTTTGATCAA GCAACCAGCT TTGCTTGGAA AGCCCATGAA GCAGAAGGTC ACTATCTGAA ATATGCTGGC GTTCAATCAG GCACTGTTCT TAAGAGCGAT TGTGCAACTT GCCACGTCGA AAAAAGCGGT GTCGTCACAG GTATTGAACT TGGCCGCGCT CCTGAGCGCA CATGGATTTA TCCAAACACA ACGACCTATG ACAAAACGGG TATTTGGGTA TCTTCTGATG CGGGTGCATG TTTAAGTTGT CACCAGAAGT ATCTGTCAGA TGCGGCTAAG TCTCACATTG AAGCTAACGG TGGTATCTTA GATGGTACTA GTGCTGCCGA TGTTAAAACC CGTGCCTCTG AAAGCTGTGC GACTTGTCAT ACTCCAGCGC AATTAATGAA AGTACACGGA AACTAA
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Protein sequence | MMKRFNFNTA TKAMLGAGLL SLLLTGCGGS DGKDGEDGKP GVVGVNIDST STLQAKFTNA TVDAGKVTVD FTLENANGVA VLGLTKDHDL RFGIAQLTHV TEATDDPAKP ADRGYQWQAY INAKKEPGTV PSGVDNLNPS AQYQANVEAA NKCDTCLVDH GDGSYSYTYQ ANIANVTEPL TVTYSADATQ RATMELDLPQ VVANAHFDWQ PSTGKTEGIQ TRNVVSIQAC YTCHQPESLE LHGGRRIDLE NCASCHTATS GDPESGNSIE FTYMIHAIHK GAERHTFDET GAEVPAPYKI VGYGGSLHDY GKVTFPLKPA ADCSACHVEG AGAPANADLF KADSSNQACI ACHTEKPSSH HSSTDCMSCH NATEPYGGTG SAAKRHGDVL KAYSDTQAMG IKFSNVGVND TGKITFDVQV VDKDGNAIDK KYVNQGSRVV VAWDSNKDYP SYADASYSNR RIALNEGTYN ETTKTYTLTG TKFSLPADAN GKTFELWSAL EVCFNNGGYG VAEIVTTDCS AENVRKVPVK EAPYHFVWKD NGVDSATSPA SRRPIVDTSN CQGCHNQQVL HYDNGVNCQT CHTPDKALKE TVRNSGKFDQ ATSFAWKAHE AEGHYLKYAG VQSGTVLKSD CATCHVEKSG VVTGIELGRA PERTWIYPNT TTYDKTGIWV SSDAGACLSC HQKYLSDAAK SHIEANGGIL DGTSAADVKT RASESCATCH TPAQLMKVHG N
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