Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2297 |
Symbol | |
ID | 4256468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2721199 |
End bp | 2722065 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122967 |
Product | LysR family transcriptional regulator |
Protein accession | YP_738342 |
Protein GI | 114047792 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.252143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.644367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAATC CACAATGGCT CAATACCTTT GCAGTGTTAG TGGAAAAGGG AAACTTTACC CGAACGGCCG AAGCCATAGG TATCACCCAA GCCGCGGTCA GCCAACATAT CAGTCGCTTA GAGGAAGAAT ACGGCACTCT ATTTTTGCGC CGTAGCCGCC AACTCGAAAT CACCCCCGTT GGTGAGCATT TGTTGAGTTA CGTCAAAGAC ATAAACTGCG CCCAGAAGCG ATTACAGCAA AAACTCATCC AAGATGATGC CCATATTGGC GAAATTAGCC TTATCACCCC AGGCAGTATC GGCTTAACAC TTTACCCATT GCTCTTACAG CTACAAACGG AGTTTTCGCA GCTAAAAATT CATCATCGTT TTGCCCCCGA TAATGAAATC CTCTCCGCTA TTCTGACCAA TCAACATGAG CTTGGGATGG TAACTTTTAA GCCATCGGAT CCTAGTATTT GCAGTCGCCA TTTTACCGAA GAACCGCTCG AGTTGGTTGT GCCCGCAGGG CATAAAATCG CTGATTGGCA AGATTTACAG CGCATCGGAT TTATCTCTCA CCCCGATGGC GAAGCCATGG CAACGCGTTT ACTGAGTCGT AAATATCCAG GGAGTCCTGG CATCCAAGAG ATCCCCTGCA AAGGTTTTAT CAATCAGATC AGTTTAATCC TCGAACCCGT TGCCAAGGGT CTCGGCTTTA CCGTGATCCC TCGCTACGCT CGCAAAGCCT TTGAACGACA AGATGAAATC TATGTGGTTG AGTGTGGCAG TCAAGTGGTG GACACCATTT GGCTTATCCA CAGAGCCGAG TGGCCTTTAT CACGTCGGGC ACAAAAAGCG ATCGCCTACT TAAAAAATAA AATTTAA
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Protein sequence | MINPQWLNTF AVLVEKGNFT RTAEAIGITQ AAVSQHISRL EEEYGTLFLR RSRQLEITPV GEHLLSYVKD INCAQKRLQQ KLIQDDAHIG EISLITPGSI GLTLYPLLLQ LQTEFSQLKI HHRFAPDNEI LSAILTNQHE LGMVTFKPSD PSICSRHFTE EPLELVVPAG HKIADWQDLQ RIGFISHPDG EAMATRLLSR KYPGSPGIQE IPCKGFINQI SLILEPVAKG LGFTVIPRYA RKAFERQDEI YVVECGSQVV DTIWLIHRAE WPLSRRAQKA IAYLKNKI
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