| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2256 |
|---|
| Symbol | |
|---|
| ID | 4255181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2675888 |
|---|
| End bp | 2676700 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638122926 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738301 |
|---|
| Protein GI | 114047751 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4798] Predicted methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.636887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TCACACTCGT CGCCAGTATG CTGATTGCTG GTCTATGTTC AGGCATGGCC
TATGCCGATG AAGGTTTGGA TAAAGCCATT AAGAGCGACT TTCGCCAAGC GAAAAACGCC
AGCCGCGATA TTTATCGCCA CCCCGCAGAA ACCCTCACAT TTTTTGGTAT TACCCCAACA
CAAACCGTGA TTGAACTCTG GCCGGGCAAT GGCTGGTACA CGGAAATTCT CGCGCCTTAT
TTAGCGCCTA AGGGACAGTA TATTGCCGCA AGCTTTGAAA CTAGCCCAAG CACAGACACC
CCAGGTAATC GCTATCGTGC CAATGCGGGC GTGAAATTCG ATACTTGGAT GACGGCTAAT
AAAGCCTTGT TTGGTAATGC GAAAATGCTG ATCCTCGACC CACCGGCCAA AATGAATTTA
GGTGCCGATG GCAGTGCTGA CTTGGTATTA ACCTTCCGTA ACTTGCATAA CTGGGCCTCA
AGCGATCAGC TGGAAAACGT GTTTGCAGCT TCCTATAAAG TGCTTAAAGA TGGCGGTGTG
TTTGGCGTGG TTGAACATAG AGCCAACAAA GGCATGAATA TAAGTACTGG CTACATGGAC
CAAGATGAGA TGATCGCGCT GGCCAAAAAA GTCGGGTTTA CCTTAGCCGA AAGCTCAGAA
ATCAACGCCA ATCCGAAAGA CACTAAGGAC TACGCTAAGG GCGTCTGGAC GCTACCACCT
TCCTTTGCTC TAGGCGATAC CGATAAGGAA AAATACCAAG CAATTGGTGA GAGCGATCGC
ATGACGCTCA AATTTATCAA AAAATCGCGC TAA
|
|---|
| Protein sequence | MKKVTLVASM LIAGLCSGMA YADEGLDKAI KSDFRQAKNA SRDIYRHPAE TLTFFGITPT
QTVIELWPGN GWYTEILAPY LAPKGQYIAA SFETSPSTDT PGNRYRANAG VKFDTWMTAN
KALFGNAKML ILDPPAKMNL GADGSADLVL TFRNLHNWAS SDQLENVFAA SYKVLKDGGV
FGVVEHRANK GMNISTGYMD QDEMIALAKK VGFTLAESSE INANPKDTKD YAKGVWTLPP
SFALGDTDKE KYQAIGESDR MTLKFIKKSR
|
|---|
| |