| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2227 |
|---|
| Symbol | |
|---|
| ID | 4256991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2642219 |
|---|
| End bp | 2643346 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638122895 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738272 |
|---|
| Protein GI | 114047722 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.547071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.313356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC TAAACTTATA TCTTATCGCA GCATGGATTT TCCTTGCATT GACAACGAGT
GCGGTACAGG CAGAAGAACC GCAAAATGGC ATTGATGTTG GCGGTACTGT TAGGGTGAAT
TATGCCTATA AAGATTACAG TCAGAGCTCA AAAGATAAGG GCGGCGATCT TACTTTCGAT
ATGGCGGCAA TTAAGTTTAA CGGTAAGCTG GGTGAGTGGG GACTTGCCAG TGAATACCGT
TTTTATGATG GCTGGCAAGC GCTGCGTTAT GGTTATGGTT TTTACGACCT TAGTGCTGAC
TGGCAGATTC AATTCGGTGT GAATCAGGTA CCTTTTGGTA ATCCTGGATT TATTTCAAAC
AGCTTCTGGT TTGGCGTGCC TTACTACTTA GGATTCGAAG ATGATTACGA CTTGGGGGTG
AAAGGGGTAT ACCAGAAGGG CGCTTGGGGG ACCGAAATGG CCTTCTATAA GAATGCGGAA
TATGGCGCTG GTCGCGCCGA TCGTTACTCA CCTGATCTGT ATAGCGGTAT TGTTAACGGT
ACCGAATACA ACAACGAAGA GACGAACCAG TTAAACCTAC GCCAAATGTA CGAGATGAGC
TATGAAGGTG GCAAAACCCT TTTGGGTGGC TCTATCGAAT ACGGCCAGAT CTATAACGAT
GCAACGGGCA ACAATGGTGA CCGCTATGCT GTCGCGATTC ATCTGGATGC GACCTACAAT
GGTTGGGGTT TGCAACTGCA GGCTATGCAG TATGAATATG ATGCAGCCGA TGCCATCGAT
AGTAATAAAA TAGCGGTCGC GGCTTACAAT TGGCAATATG AGATTGCCTC TAAGGCGCAG
GCATACAGCG TCAATATCGC AAAGACAGTC ACGACCGATT GGGGCAGTCT TAAATTCTAT
AATGATTTTG GCATGGTGAC ACCGGATGTA TCCGATGACA GCTTTGATAC CAGCTATCAA
AATGTGACTG GCTGCGCCAT TGCAGCAGGC CCAACTTATA CCATGGTCGA TTTTATTATG
GGTAAAAACA TGTATGCCTC CACTCGCGAC AATGGTCACG TTGGTTTACC TGAAATCGGT
GATAGTTGGG ATAAGCGAGT TAATATTAAT TTCGGATATT ATTTCTAA
|
|---|
| Protein sequence | MKNLNLYLIA AWIFLALTTS AVQAEEPQNG IDVGGTVRVN YAYKDYSQSS KDKGGDLTFD
MAAIKFNGKL GEWGLASEYR FYDGWQALRY GYGFYDLSAD WQIQFGVNQV PFGNPGFISN
SFWFGVPYYL GFEDDYDLGV KGVYQKGAWG TEMAFYKNAE YGAGRADRYS PDLYSGIVNG
TEYNNEETNQ LNLRQMYEMS YEGGKTLLGG SIEYGQIYND ATGNNGDRYA VAIHLDATYN
GWGLQLQAMQ YEYDAADAID SNKIAVAAYN WQYEIASKAQ AYSVNIAKTV TTDWGSLKFY
NDFGMVTPDV SDDSFDTSYQ NVTGCAIAAG PTYTMVDFIM GKNMYASTRD NGHVGLPEIG
DSWDKRVNIN FGYYF
|
|---|
| |