| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2179 |
|---|
| Symbol | |
|---|
| ID | 4256120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2580045 |
|---|
| End bp | 2581265 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638122847 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_738224 |
|---|
| Protein GI | 114047674 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG TGCCAACTAG CCAAGCACCA ACGAGTAATG TGCCTGTGAC AAATATTCCC
AGCGCCAATT ACGCCAGCAA TACTCTCGAT AACAATACTC TCGACAACAA TACTCTCGAC
AACAATACTC TCGAAAACAT AAGCATCGGG CCAACAACCC TTGCCGCACG TCTTGCTCGG
CCCGAACTGC TCGAGTTAAC GCCTTACCAA AGTGCTCGCA GGCTAGGTGG TCGAGGGGAT
ATTTGGATCA ACGCTAACGA ATCGCCCTTC AATAATGTGG CCGTTGCCGA ACTCGATTTA
TCTAAGTTAA ATCGTTACCC CGAGTGCCAA CCGCCCGCGT TAATCAATGC CTACAGCCAA
TACAGCGGTG TTGCGGAGAG CAAAATTGTT GCCAGTCGCG GCGCCGATGA GGCCATCGAA
CTGCTGATCC GTGCTTTTTG TATCCCAGGT ATCGACTCAA TTGCCACCTT TGGGCCCACT
TACGGCATGT ACGCCATTAG CGCACAAACC TTTAATGTAG GCGTTAAGGC GTTAAGCTTA
ACGGCTGAGT ACGCTCTCCC AAGCGACTTT GCGACGGCCG CGCGCGGCGC TAAGTTAGTG
TTTATCTGTA ATCCCAATAA CCCAACTGGC ACTGTGATTG ACAAGGCGCG CATAGAGCAA
GCCATACAAG CCCTACCCGA CGCCATCGTT GTTGTCGATG AGGCTTATAT CGAGTTTTGC
CCCGAATATA GCGTCGCCGA TTTACTCGAG TCTTACCCAA ACCTTGTGGT GCTGCGCACC
CTTTCAAAGG CCTTTGCCTT AGCGGGTGCG CGCTGCGGCT TTTTGCTCGC CAATGAAGAG
ATTATCGAAA TCATCATGCG GGTGATTGCG CCCTATCCTG TGCCATTGCC CGTGAGTGAA
GTGGCCGTGC AAGCGCTATC AGCTGCAGGG ATTGCGCGGA TGAAAGCCCA AGTCAAAGCG
CTCAATGCTC AGGGCGAGCG ACTCGCGGCG GCGCTGAATT TGTACTGCGA GCAATGGGGC
GGCGCCGTGC TAACACCCAA TGGTAACTAT GTGCTCGCCG AATTTGACGA CGTGGCAAAA
GTGGCAAAGC TGCTTATCGA CAATGGCATT GTCGCGCGGG CCTATAAGGA CCCAAGGCTG
GCTAAAGCCA TTCGTTTTAG CTTTAGCTCT CAGGCTGACA CCGACCGCTT AGTGTCACTC
TTTGAATCGC AAAAGCTGTG A
|
|---|
| Protein sequence | MSQVPTSQAP TSNVPVTNIP SANYASNTLD NNTLDNNTLD NNTLENISIG PTTLAARLAR
PELLELTPYQ SARRLGGRGD IWINANESPF NNVAVAELDL SKLNRYPECQ PPALINAYSQ
YSGVAESKIV ASRGADEAIE LLIRAFCIPG IDSIATFGPT YGMYAISAQT FNVGVKALSL
TAEYALPSDF ATAARGAKLV FICNPNNPTG TVIDKARIEQ AIQALPDAIV VVDEAYIEFC
PEYSVADLLE SYPNLVVLRT LSKAFALAGA RCGFLLANEE IIEIIMRVIA PYPVPLPVSE
VAVQALSAAG IARMKAQVKA LNAQGERLAA ALNLYCEQWG GAVLTPNGNY VLAEFDDVAK
VAKLLIDNGI VARAYKDPRL AKAIRFSFSS QADTDRLVSL FESQKL
|
|---|
| |