Gene Shewmr7_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2159 
Symbol 
ID4257640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2555225 
End bp2557075 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content51% 
IMG OID638122827 
Producthypothetical protein 
Protein accessionYP_738204 
Protein GI114047654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.428916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.364676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA TCAGATTTGA GTTTACCTGC TCGCGTCAGG TGCCTTTGTA TGCGCATTTA 
TGTAATCAAT ACCTAAATTA CGATGCGCTC AATATCAGCA TTGGCTGCGA CAGTCAGCAG
GATTTTGGTT CGCACACTTA TTTTATTGAG GCCCAAGGCG AACAAGCGCA GCTAGAACAG
TTAGCCGAGG CGATCGCCGC CGACTTTTTA ATTTCAGTCT GGCTGGTCGA CTCAGGCATT
CATGCGATTG AGGCGCCACA GGGACAGCGG ACATTATTGA CCGTCCCACC CACTGAGGGG
GCGCTTAACG TGCAATCGGT CGCGGCTTTT TGCCAGCAGT GTTATCCCCG ATTTGGTGAT
AATCAGGCGG CGCAATTTGG TCAGCTCGAT ATAGCCTGCG CATGCTGCCA CGGAGAAAAG
CGCTTAACCA GCGCCCAAAA GGCGTTAACG CTGTCCGATC TCAAGGCGAT GGCCGCACAG
CTTATCAGCC AAGGCTCACT CGATTTAGCC AGCGAAGGCG TGCAATTAAG CCTAACACCC
TTTGCCCATA CAACAGCGTC CAGACCGCAA CTGCTAATTT GTAATCCCAA TACCCTCAAC
GCGCATTTTT GCCTGAAGGA TAATCAAGTC CTCGCCCTAT CCAGTATCGA AAAACCGCTG
ATGTGTGTCA GACCAACCCA AGATAATCAA AAGCTGCCCG CACCACTCTA CGATATCTGC
TTTGGTTACA GCCGAGTGGT GTTAGTGCTG AGTGAAATCC TGCGGCAAAA AGGTATCGAT
TGGGTTTATC TTGAGGGAGC GCACCAGAGG CCGGCGCTAG CCTGGGTCGA TGGCGCTTGG
GCTCAGTTAG GCAGCCACAC AACCGAAAGC ACAGCGCCGC AAACCATTAA GCAATTCAGT
GCGCCGGAGC CCCTGCGGGA AGACATCCAT TTTTTAGGCT TTAAGGCCAA ATGGCAAGCC
AATAAGAAAA GCCGTTCACA CCAAGGTTTA TTGACTGTGC AGGCCATACC AAATGAGGCC
GATACAGCTG AATATGCCGC GAGTGGGGAA GACCATACCA TAGCGGATGC AGCCCTGTTT
GCAGCGCTGC TTAATGGTAA ATTCACGACC CATAAGCAGG CTAAACATGC GGCGGTGATT
TACTTAAGCC ATCACCACAC TGGGCAAATC GTCACCTGCG ACAATAAGGG AGACACCTCA
CTGTTTTTCG CCCTGCCCGA ACTACCGAAC AATGGTTACG AGATTTTCCA TTGCCTCGAC
AGCAGTCCAC AAAAAGCCGT CGCGCAAAAA TTTAAGAGCT TGTTTCCAGA AGACTACTTA
AAGCTGCTGA GCCTAAAACT TAACGGCAGA CGCGATAATC TTCAGAGTCT GTGGGCGATT
GCTGCAGTAT TGATTGGCCT AAATCCACAG GAAGAAACTC AATCGCAAGC TTATTTGAGC
GATGCACTGC TTGCCGCCGC CATGCGTTAC CATGGTGCGA ATGCGCCGCG CATCGATTAT
CCCCTCACCA AAGGTGAGGC CCACCGCAGC CTGAATTGGT GTAAAATCCT AGGCACGCTG
CTGAGTTTTC GCGTTGCCGG GCACAGCGAT CCGAGTCAAC TGGCCTTTGC AATGCAGGAT
TCCCTCGCCG ACTACCTCGC GAATTGGCTT GAACACATTG ACTTAAATAT CGGTGTGCAC
AACATTGCGT TAGCGGGTAA TGAGTTAGCC AACGAAACCC TCTGCAAGCG TATTAGCCTA
CGACTCGGGA AAAACTTCCC GCTAATGGTC AATCGCAGTC TGGATTTAGA GGGCGACAAC
CTAGCCGTAG GCGCGCTCTA TGTGAAGCAG CGGCAGTTAA ATAACCTTTA A
 
Protein sequence
MKHIRFEFTC SRQVPLYAHL CNQYLNYDAL NISIGCDSQQ DFGSHTYFIE AQGEQAQLEQ 
LAEAIAADFL ISVWLVDSGI HAIEAPQGQR TLLTVPPTEG ALNVQSVAAF CQQCYPRFGD
NQAAQFGQLD IACACCHGEK RLTSAQKALT LSDLKAMAAQ LISQGSLDLA SEGVQLSLTP
FAHTTASRPQ LLICNPNTLN AHFCLKDNQV LALSSIEKPL MCVRPTQDNQ KLPAPLYDIC
FGYSRVVLVL SEILRQKGID WVYLEGAHQR PALAWVDGAW AQLGSHTTES TAPQTIKQFS
APEPLREDIH FLGFKAKWQA NKKSRSHQGL LTVQAIPNEA DTAEYAASGE DHTIADAALF
AALLNGKFTT HKQAKHAAVI YLSHHHTGQI VTCDNKGDTS LFFALPELPN NGYEIFHCLD
SSPQKAVAQK FKSLFPEDYL KLLSLKLNGR RDNLQSLWAI AAVLIGLNPQ EETQSQAYLS
DALLAAAMRY HGANAPRIDY PLTKGEAHRS LNWCKILGTL LSFRVAGHSD PSQLAFAMQD
SLADYLANWL EHIDLNIGVH NIALAGNELA NETLCKRISL RLGKNFPLMV NRSLDLEGDN
LAVGALYVKQ RQLNNL