Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2159 |
Symbol | |
ID | 4257640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2555225 |
End bp | 2557075 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638122827 |
Product | hypothetical protein |
Protein accession | YP_738204 |
Protein GI | 114047654 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.428916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.364676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA TCAGATTTGA GTTTACCTGC TCGCGTCAGG TGCCTTTGTA TGCGCATTTA TGTAATCAAT ACCTAAATTA CGATGCGCTC AATATCAGCA TTGGCTGCGA CAGTCAGCAG GATTTTGGTT CGCACACTTA TTTTATTGAG GCCCAAGGCG AACAAGCGCA GCTAGAACAG TTAGCCGAGG CGATCGCCGC CGACTTTTTA ATTTCAGTCT GGCTGGTCGA CTCAGGCATT CATGCGATTG AGGCGCCACA GGGACAGCGG ACATTATTGA CCGTCCCACC CACTGAGGGG GCGCTTAACG TGCAATCGGT CGCGGCTTTT TGCCAGCAGT GTTATCCCCG ATTTGGTGAT AATCAGGCGG CGCAATTTGG TCAGCTCGAT ATAGCCTGCG CATGCTGCCA CGGAGAAAAG CGCTTAACCA GCGCCCAAAA GGCGTTAACG CTGTCCGATC TCAAGGCGAT GGCCGCACAG CTTATCAGCC AAGGCTCACT CGATTTAGCC AGCGAAGGCG TGCAATTAAG CCTAACACCC TTTGCCCATA CAACAGCGTC CAGACCGCAA CTGCTAATTT GTAATCCCAA TACCCTCAAC GCGCATTTTT GCCTGAAGGA TAATCAAGTC CTCGCCCTAT CCAGTATCGA AAAACCGCTG ATGTGTGTCA GACCAACCCA AGATAATCAA AAGCTGCCCG CACCACTCTA CGATATCTGC TTTGGTTACA GCCGAGTGGT GTTAGTGCTG AGTGAAATCC TGCGGCAAAA AGGTATCGAT TGGGTTTATC TTGAGGGAGC GCACCAGAGG CCGGCGCTAG CCTGGGTCGA TGGCGCTTGG GCTCAGTTAG GCAGCCACAC AACCGAAAGC ACAGCGCCGC AAACCATTAA GCAATTCAGT GCGCCGGAGC CCCTGCGGGA AGACATCCAT TTTTTAGGCT TTAAGGCCAA ATGGCAAGCC AATAAGAAAA GCCGTTCACA CCAAGGTTTA TTGACTGTGC AGGCCATACC AAATGAGGCC GATACAGCTG AATATGCCGC GAGTGGGGAA GACCATACCA TAGCGGATGC AGCCCTGTTT GCAGCGCTGC TTAATGGTAA ATTCACGACC CATAAGCAGG CTAAACATGC GGCGGTGATT TACTTAAGCC ATCACCACAC TGGGCAAATC GTCACCTGCG ACAATAAGGG AGACACCTCA CTGTTTTTCG CCCTGCCCGA ACTACCGAAC AATGGTTACG AGATTTTCCA TTGCCTCGAC AGCAGTCCAC AAAAAGCCGT CGCGCAAAAA TTTAAGAGCT TGTTTCCAGA AGACTACTTA AAGCTGCTGA GCCTAAAACT TAACGGCAGA CGCGATAATC TTCAGAGTCT GTGGGCGATT GCTGCAGTAT TGATTGGCCT AAATCCACAG GAAGAAACTC AATCGCAAGC TTATTTGAGC GATGCACTGC TTGCCGCCGC CATGCGTTAC CATGGTGCGA ATGCGCCGCG CATCGATTAT CCCCTCACCA AAGGTGAGGC CCACCGCAGC CTGAATTGGT GTAAAATCCT AGGCACGCTG CTGAGTTTTC GCGTTGCCGG GCACAGCGAT CCGAGTCAAC TGGCCTTTGC AATGCAGGAT TCCCTCGCCG ACTACCTCGC GAATTGGCTT GAACACATTG ACTTAAATAT CGGTGTGCAC AACATTGCGT TAGCGGGTAA TGAGTTAGCC AACGAAACCC TCTGCAAGCG TATTAGCCTA CGACTCGGGA AAAACTTCCC GCTAATGGTC AATCGCAGTC TGGATTTAGA GGGCGACAAC CTAGCCGTAG GCGCGCTCTA TGTGAAGCAG CGGCAGTTAA ATAACCTTTA A
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Protein sequence | MKHIRFEFTC SRQVPLYAHL CNQYLNYDAL NISIGCDSQQ DFGSHTYFIE AQGEQAQLEQ LAEAIAADFL ISVWLVDSGI HAIEAPQGQR TLLTVPPTEG ALNVQSVAAF CQQCYPRFGD NQAAQFGQLD IACACCHGEK RLTSAQKALT LSDLKAMAAQ LISQGSLDLA SEGVQLSLTP FAHTTASRPQ LLICNPNTLN AHFCLKDNQV LALSSIEKPL MCVRPTQDNQ KLPAPLYDIC FGYSRVVLVL SEILRQKGID WVYLEGAHQR PALAWVDGAW AQLGSHTTES TAPQTIKQFS APEPLREDIH FLGFKAKWQA NKKSRSHQGL LTVQAIPNEA DTAEYAASGE DHTIADAALF AALLNGKFTT HKQAKHAAVI YLSHHHTGQI VTCDNKGDTS LFFALPELPN NGYEIFHCLD SSPQKAVAQK FKSLFPEDYL KLLSLKLNGR RDNLQSLWAI AAVLIGLNPQ EETQSQAYLS DALLAAAMRY HGANAPRIDY PLTKGEAHRS LNWCKILGTL LSFRVAGHSD PSQLAFAMQD SLADYLANWL EHIDLNIGVH NIALAGNELA NETLCKRISL RLGKNFPLMV NRSLDLEGDN LAVGALYVKQ RQLNNL
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