| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2135 |
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| Symbol | |
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| ID | 4255269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2521951 |
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| End bp | 2524440 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122803 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_738180 |
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| Protein GI | 114047630 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000411106 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAGAC GTGACTTTAT CAAAGCCAAT GCGGTGATTG CAGCAGCGGG CGCCGCAGGG
TTAGCACTGC CGGCATCGGC GAGCAACTTA ATCACCAGCT CAGAACAAAC CAAATTAGAG
TGGAACAAAG CGCCTTGCCG TTTCTGTGGT ACGGGTTGCT CTGTGATTGT CGCGACCCGT
GATGGCAAAG TGGTTGCTAC CCATGGCGAT GCAAACAGCG AAGTGAACCG CGGCCTCAAC
TGCATTAAGG GTTACTTCCT GTCGAAAATT ATGTACGGCA GCGATCGTTT GACCACGCCA
ATGCTCAGAA TGACCGACGG CAAATACGAC AAACACGGTG AGTTTACCCC TATTAGCTGG
GACAGCGCCT TCGATATCAT GGCGCAAAAA TGGAAAGAAA CCCTAAAAGC CAAAGGCCCC
ACTGCTGTTG GGATGTTTGG CTCGGGTCAG TGGACCGTTT GGGAAGGCTA TGCCGCCGTT
AAATTGATGA AGGCGGGCTT TGGCTCTAAC AACATCGACC CGAATGCGCG TCACTGTATG
GCGTCTGCCG TTGTGGGCTT TATGCGTACC TTCGGTATCG ATGAGCCTAT GGGCTGTTAC
GATGATATGG AAGCGGCCGA TGCCTTTGTG CTTTGGGGCT CCAACATGGC CGAAATGCAC
CCGATCTTAT GGACTCGAGT GACTGACCGT CGTTTAAGCG CATCCCATGT GAAGGTGGCT
GTACTGTCGA CCTTCGAGCA TCGCTCCTTC GACCTCGCGG ATTTACCGAT TGTATTTACG
CCACAAACCG ACTTAGCCAT CCTAAACTTT ATCGCCAACT ACATTATTCA AAACGATAAA
GTGAACTGGG ACTTTGTGAA GAAGCACGTT AACTTCCGCC AAGGTACCAC GGATATCGGC
TATGGTTTAC GTCCAACCCA TCCGCTGGAG CAGAAAGCCA AAAACGTGAA AACGGCAGGG
GATTCGACTC CGATTGATTT CGATACCTTC AAGGCCTTTG TCGCCGAATA TACGGTGGAG
AAGGTCAGCA AGATGTCGGG TGTGCCTGAG GCTAAATTGA TTGAATTGGC CAAACTCTAT
GCCGATCCTA ATACCAAGGT CACCTCGTTC TGGACCATGG GCTTTAACCA ACATACCCGC
GGCGTGTGGT GTAATAACCT GATTTATAAC ATCCACTTAC TGACAGGTAA GATTTCGACC
CCTGGTAACA GCCCGTTCTC GTTAACCGGT CAGCCTTCTG CCTGTGGTAC GGCTCGTGAA
GTGGGGACTT TCTCCCACCG TTTACCGGCC GATATGGTGG TGACTAACCC AGAGCATAGA
AAACACGCCG AAGAAATTTG GAAGATCCCT AGTGGCATTA TTCCGCCAAA ACCCGGTTAT
CACGCCGTAG AGCAAAACCG CCGCTTAAAA GATGGCGACT TGAACTGCTA TTGGGTGCAA
GTGAACAACA ATATGCAGGC AGGGCCGAAC ATCAATGAGG AAGGTTTACC TGGCTATCGT
AATCCCGCCA ACTTTATTGT GGTGTCTGAT GCGTATCCCA CTGTCACGAC TCAGGCTGCG
GACTTAATTT TGCCAACCGC CATGTGGGTT GAGAAAGAGG GCGCCTATGG TAATGCTGAG
CGTCGTACTC AATTTTGGCA TCAAATGGTG CAAGCGCCTG GCGAATCCCA CTCGGATCTG
TGGCAGTTGA TGGAGTTCTC TAAGCGCTTT ACGACCGACG AGGTCTGGTC GAAGGAAGTC
TTAGCGGCGA ATCCACAATT TAAGGGCAAA ACCTTATTTG AAGTGCTGTA CCAAAACGGC
AATGTCGATA AGTTCCCACT GGCCGATACC GATCCTAAGT ATTTGAACAA CGAGGCGAAA
CATTTTGGCT TCTATGTCCA AAAAGGCCTG TTCGAAGAAT ATGCGACCTT TGGCCGTGGT
CATGGCCACG ATTTAGCGCC TTTCGAGGCC TACCATGAAG CTCATGGTCT TCGCTGGCCC
GTGGTCGATG GTAAAGAAAC CAAGTGGCGT TTCCGTGAGG GCAGCGATCC CTACGTCAAG
GCTGGCACTG GCTTCGAATT CTACGGTAAA CCCGATGGCC GCGCGGTGAT TTTCGCCTTG
CCTTTCGAGC CACCCGCAGA ATCACCAGAT GATGAATACG ATATGTGGTT ATCAACTGGA
CGTGTGCTTG AGCATTGGCA CTCAGGTTCG ATGACTCAAC GCGTGCCAGA GCTTTATCGT
GCCTTCCCCG ATGCTGTGTG TTTTATGCAC CCAGAGGACG CCAAAAAACG CGGTTTACGC
CGTGGGGATG AAGTGCGGGT TATGTCTCGC CGCGGTGAAA TCAAAACCCG TGTCGAAACC
CGTGGCCGTA ACAAGCCGCC TGTGGGCCTA GTATTTGTAC CTTGGTTCGA TGCCAGTCAG
CTCATTAATA AAGTCACCTT GGATGCGACA GATCCGCTGT CGAAACAAAC CGACTTTAAG
AAATGCGCCG TGAAAATCGT CAAGGTATAA
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| Protein sequence | MNRRDFIKAN AVIAAAGAAG LALPASASNL ITSSEQTKLE WNKAPCRFCG TGCSVIVATR
DGKVVATHGD ANSEVNRGLN CIKGYFLSKI MYGSDRLTTP MLRMTDGKYD KHGEFTPISW
DSAFDIMAQK WKETLKAKGP TAVGMFGSGQ WTVWEGYAAV KLMKAGFGSN NIDPNARHCM
ASAVVGFMRT FGIDEPMGCY DDMEAADAFV LWGSNMAEMH PILWTRVTDR RLSASHVKVA
VLSTFEHRSF DLADLPIVFT PQTDLAILNF IANYIIQNDK VNWDFVKKHV NFRQGTTDIG
YGLRPTHPLE QKAKNVKTAG DSTPIDFDTF KAFVAEYTVE KVSKMSGVPE AKLIELAKLY
ADPNTKVTSF WTMGFNQHTR GVWCNNLIYN IHLLTGKIST PGNSPFSLTG QPSACGTARE
VGTFSHRLPA DMVVTNPEHR KHAEEIWKIP SGIIPPKPGY HAVEQNRRLK DGDLNCYWVQ
VNNNMQAGPN INEEGLPGYR NPANFIVVSD AYPTVTTQAA DLILPTAMWV EKEGAYGNAE
RRTQFWHQMV QAPGESHSDL WQLMEFSKRF TTDEVWSKEV LAANPQFKGK TLFEVLYQNG
NVDKFPLADT DPKYLNNEAK HFGFYVQKGL FEEYATFGRG HGHDLAPFEA YHEAHGLRWP
VVDGKETKWR FREGSDPYVK AGTGFEFYGK PDGRAVIFAL PFEPPAESPD DEYDMWLSTG
RVLEHWHSGS MTQRVPELYR AFPDAVCFMH PEDAKKRGLR RGDEVRVMSR RGEIKTRVET
RGRNKPPVGL VFVPWFDASQ LINKVTLDAT DPLSKQTDFK KCAVKIVKV
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