| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2119 |
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| Symbol | |
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| ID | 4255534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2506828 |
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| End bp | 2509500 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638122787 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_738164 |
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| Protein GI | 114047614 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.817127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00248227 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTACGC AAACAACCGT GGCGCGTGCG GTTCGTTTTA GTTTACTCGC TTTAGTCTCC
GCCTCGGTGA CACCGCAAGT ATTTGCCGCC GATGAAGCGG CCGTTATCGA TGATAAAGTG
GAGCGTATTG AGGTTACGGG TTCACGTATT AAACGTACCG ATCTTGAAAA TGCCTCCCCT
ATCGTGGTGG TGAGCGCCGC AGATATCGAA AAAGGCGGCT TTAACTCAGT GCAAGACGTG
TTAGGCAACC TGTCGCAAAA CTCCGGTGGG TCGATGACTC AACAGGAAGT GCACGGCTTT
ACCCCAGCAG CATCTGCCGT CAACCTTCGT GGTGTGGGCG CTGGACGTGT GCTGACGCTG
ATCAACGGTA AACGTGTGCC TAAATATCCC TTTGGCGCCG GTGGCACCGA CAGCTTTGTC
GACACCGCCA ACATTCCGTT AGGGGCGATT GAGCGTATTG AAATTTTAAC CACGGGTGCC
TCGGCCATTT ACGGCTCCGA TGCGATGGGC GGTGTAATCA ACATCATCTT GAAAAAAGAC
GTTGAGCAAA GCACCTTCAA ATACCGCCAC TCAGATACCT TCGATGGCGG CCTGCAGAAC
AGCCAGTTCT CCTTTATGAC GGGTGTCAGC AGCGATAAAG CGAATCTGAC TTTCTTCGCC
GAATATGAAG ATCGCCAAGC ATTAAAAGCC TCAGATCGCC CTGAATGGGG CACTGATATT
ATCCCGGGTA ACTATTATGC TGGTTACAGC TCCTATGGCG CCAACCTTGT GGATAGCAAT
GGCAAACTAC TCAAGAGCTT AAGTGCCGCC GAATGTGATG CACGCGGCTA TGTGATGATG
TCCAATGGCA AATGTGGTTT CGATCGCTCC GCACAGCGCG ACTTTTCGCC TGAGCAAACG
CGCTACTCCA CCATGATTAA CCTCACCAAA GACTTAAACG ACAATCATCA GCTGTATTCG
CGTCTCGATT ACACCCATGC CTCGACCTAC ACAGAAATTG AATCGGCCAC TGTGGGCGAC
GATTTTATGT TTAACGTGTC GGGCGATAAC GTCACTATCG TCGATGAGCT CAATGGCTTA
TCCCAAGTGT TCGATAAAAA TACCGCCTTC GGCGGAGATT TTGCCGGCGC TGCCGATGGG
GACTATTACT ACACTCGCCG TATGTCTGAG TTAGGTCCAC GCACCTCTGA TTTTGAGACC
AATAACTTCT CCTTCTTATT AGGTAGCAAA GGTTACCTCA CTGATACTAT CGAGTACGAC
ACCTCGTGGT CGATTGCGCG TCAAACGGTA GACTCTACCA CCGCAGGTTC GCCAACCTAC
CAAAGCATGT GGAACTACCT CACCGCGGGT ACTAACGGCA ATTCGTTACT GGATGTGATT
TCACCGGACG ATGCCGCAAT GCTGGACTTC CAAGGCGGTA AAAAGGGGCA ATCCACCCTA
TCGAGCTTTA ACGCAGGGAT CAGTGGCGAT GCCTTTGAAT TACCAGCAGG AACAGTAGCT
TATGCCGTGG GCGTCGAATA CGGTAAAGAA TGGTTCTACG ATAAGTCCGA TAGCTTCACC
AGCAATGGTG GCGTGATTGG TAAAGGCGGC AGTAGCGCTC AAGGTGAACG TGAGCAATAC
GCAGGTTATG CCGAAGTCGC CGTGCCTGTG ATCGAAAACC TCACCGTTAC TCTTGCGGGC
CGTTACGACT ACTATGACGA TTTATCCGAT GTCGGCGGTC AATTCAGCCC ACAAGTCGCA
GTCGAGTATC GCCCGATTGA TAATCTGTTG TTACGCGGTC TGTATGCAGA AACCTTCCGA
GCGCCAGACA TGCAGCGCTT ATTTGGTGAA CCAACGGCAG CCTATAGCAC AGTGATCGAC
ACTCCAACCT GTGAGGCCGC GGGTGGCACG GGCCCTGCCT GTGAGAAGAT TGACTCACTG
CCAATTACTA TCGGTGCAAA CCCAGAACTT GAAGCGGAAA CCGGTAAAAA CTATAACCTC
GGCATGGTGT GGGATTATAA CGATCTCAAT TTAACCTTGG ACTACTGGAT TGTTGAAATC
GATAACCTAG TCAATAGCCC AAGCGCCCAG TATATCTTGG ATCACTCTGA CGCCTTCGCC
GATAAGATTT TCCGCGATGC AAGCGGCAAG TTAATTCAAG TGAATACTCA AGCCATCAAC
ATGTCATCCC AAGAAACTTC GGGTATCGAC TTCTCGGTGG GCTATCGCTA TGAGACTTCA
GGCTACGGCG ATGTCACCGC CCGCTTGGAA GGCACCTATT TGCTGAAGTG GGAAGAGCAA
TTAACCCCAG ATTCTGAGCC TTTAGATCTG ATCGATGGTG ACGACTCTGC CCCGCAAATC
CGCGGTAACT TAAATCTGGG TTGGAACTAC GATGACTTCG CTACCAACCT GCTGATCAAG
TACACCGACA GCATGAATGG TCAGCGTAAA GAGGCATTCA TTAACAATGG CTTGGCGGAT
AAATATGCCG TCACTATCGA CAGCCATGTC GAAGTGAACT GGGCCGCCAG CTATATGTTA
ACCGATGCGA TTAAGTTCTC CGGCGGGATT AATAATATCT TCGATGCAGG CCCTGAGATT
GATGAAACCC AAAACTCTTG GCCGCATTAC CCACGTTCTT ACTACAACGT TGTTGGGCGT
GAATATTATT TAGCGGTAGA GATGAACTTC TAA
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| Protein sequence | MTTQTTVARA VRFSLLALVS ASVTPQVFAA DEAAVIDDKV ERIEVTGSRI KRTDLENASP
IVVVSAADIE KGGFNSVQDV LGNLSQNSGG SMTQQEVHGF TPAASAVNLR GVGAGRVLTL
INGKRVPKYP FGAGGTDSFV DTANIPLGAI ERIEILTTGA SAIYGSDAMG GVINIILKKD
VEQSTFKYRH SDTFDGGLQN SQFSFMTGVS SDKANLTFFA EYEDRQALKA SDRPEWGTDI
IPGNYYAGYS SYGANLVDSN GKLLKSLSAA ECDARGYVMM SNGKCGFDRS AQRDFSPEQT
RYSTMINLTK DLNDNHQLYS RLDYTHASTY TEIESATVGD DFMFNVSGDN VTIVDELNGL
SQVFDKNTAF GGDFAGAADG DYYYTRRMSE LGPRTSDFET NNFSFLLGSK GYLTDTIEYD
TSWSIARQTV DSTTAGSPTY QSMWNYLTAG TNGNSLLDVI SPDDAAMLDF QGGKKGQSTL
SSFNAGISGD AFELPAGTVA YAVGVEYGKE WFYDKSDSFT SNGGVIGKGG SSAQGEREQY
AGYAEVAVPV IENLTVTLAG RYDYYDDLSD VGGQFSPQVA VEYRPIDNLL LRGLYAETFR
APDMQRLFGE PTAAYSTVID TPTCEAAGGT GPACEKIDSL PITIGANPEL EAETGKNYNL
GMVWDYNDLN LTLDYWIVEI DNLVNSPSAQ YILDHSDAFA DKIFRDASGK LIQVNTQAIN
MSSQETSGID FSVGYRYETS GYGDVTARLE GTYLLKWEEQ LTPDSEPLDL IDGDDSAPQI
RGNLNLGWNY DDFATNLLIK YTDSMNGQRK EAFINNGLAD KYAVTIDSHV EVNWAASYML
TDAIKFSGGI NNIFDAGPEI DETQNSWPHY PRSYYNVVGR EYYLAVEMNF
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