| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2099 |
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| Symbol | |
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| ID | 4258366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2479190 |
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| End bp | 2479873 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638122767 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_738144 |
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| Protein GI | 114047594 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0169079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.972179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAGCC AGAGTTTGAT AGAGCCGCAA ATGAGTCATG AAAAACCATT GAATATCAGT
GGATATAGCC TTAGTGAAGA GATAGCCAAT AGCATAAGCC ATGGTCTAGG GGTGATCGCG
GGTGTGGTAG GCTTAGTGTT TATGATCCTT AAAGGCGCCA ACCACCTCAC CAATATTCAG
CTCACAGGTG TTATTATTTA TGGCGCAAGC CTCATCCTGT TGTTTTTAAG TTCTACCTTG
TATCACAGCG TGACGCATGT CGGCTGGAAA CATAAACTCA AGATTGCCGA CCATTGTGCC
ATCTACTGCT TGATTGCAGG TACCTACACT CCACTGATGT TAATCAGCCT GCAAGGACAG
CTTTCAACCA TTATCCTCAC GGCGATTTGG TCACTGGCCA TTGGTGGCAT TCTATTTAAA
ACCTTATTTA TTCATCGCTT TAAAAAGCTC AGTCTCGTGC TCTATCTGGC GATGGGATGG
CTGTGTGTAA CTGTGATTGG CGATCTGACG GCGGCGATGT CACCGATTGG ATTTAATTTA
CTGCTATTGG GTGGATTGTT TTACACCTTA GGGGTGATTT TCTATGTCGG TAAACGCATT
CCGTACAACC ATGCAATTTG GCATTTATTT GTGTTGGCGG GGGCGATGAG CCATTTCTTC
TGTATTTATT TAACCGTGAT CTAG
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| Protein sequence | MPSQSLIEPQ MSHEKPLNIS GYSLSEEIAN SISHGLGVIA GVVGLVFMIL KGANHLTNIQ
LTGVIIYGAS LILLFLSSTL YHSVTHVGWK HKLKIADHCA IYCLIAGTYT PLMLISLQGQ
LSTIILTAIW SLAIGGILFK TLFIHRFKKL SLVLYLAMGW LCVTVIGDLT AAMSPIGFNL
LLLGGLFYTL GVIFYVGKRI PYNHAIWHLF VLAGAMSHFF CIYLTVI
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