Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2084 |
Symbol | |
ID | 4258351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2460079 |
End bp | 2460903 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638122752 |
Product | hypothetical protein |
Protein accession | YP_738129 |
Protein GI | 114047579 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4067] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0557102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.445635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAGC AGTTGATCGC TATCGCCGTT GCCAGCAGCT TAATGGGATG CGCAGCGACA GAACCGACCG CCCACGCCCC CACACTGCTC GATACCGATA CCTTTAATAC CCGTCTTAAT CAGCAGCAAG ACCATTTAGC TGCGACAATT AGCCAGCAAT GCCAGCCTGC GGATTTAACC TCGCTTGCGA CACTCAACAG CCAAGTCGAG CAGCTCGGTC TGCAAATCAA TCATTTAAAT CAAGCGGCAA AAAACCTCAC CGCACAGAAG CAAGCCGCGG TGGTGACGCC TGCACCGAGC CAATGCCCTA AATCCGCTCT TGGGGACAAG TTCTTACTCG GTGAAATCGA AAATGTGTTT ATCGATGAAC TCAACGCCAG TTTTGCCACC CGCATTGATA CTGGCGCGGA GTCCTCCTCC ATCGATGCCC GTAATATCAC CCTGTTTGAA CGGGATGGCG CCCAGTGGGT GCGTTTCGAT ATTTATACCC AAGGGGATAA ACAGCCAGCG ACCAATTTCG AATCTAAGGT CGTACGCTTT GTGCGGATCA AGCAGGACGC CAATGAGAAA GACGATCGCC GCCCCGTGAT CCACGCGCAC CTTAAGATTG GCCAATATTC AGCAGAGACT GATCTTAACC TCACCGACCG TAGTCACCTC GACTACCCCT TATTGCTCGG CCGCAAATTT ATTAAAGATA TCGCCGTCGT CGATGTCGGC CAGCGTTATA TACACGGTAA AGCCAAACAG CCCAAAGCCA CAAAACAACC CGATCCTGAA CAACCTAAAG CAGAGTCAGC TATCGTCTCC AGCAGCAAAA AATAG
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Protein sequence | MLKQLIAIAV ASSLMGCAAT EPTAHAPTLL DTDTFNTRLN QQQDHLAATI SQQCQPADLT SLATLNSQVE QLGLQINHLN QAAKNLTAQK QAAVVTPAPS QCPKSALGDK FLLGEIENVF IDELNASFAT RIDTGAESSS IDARNITLFE RDGAQWVRFD IYTQGDKQPA TNFESKVVRF VRIKQDANEK DDRRPVIHAH LKIGQYSAET DLNLTDRSHL DYPLLLGRKF IKDIAVVDVG QRYIHGKAKQ PKATKQPDPE QPKAESAIVS SSKK
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