Gene Shewmr7_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1793 
Symbol 
ID4258517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2114868 
End bp2116058 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content43% 
IMG OID638122452 
Producthypothetical protein 
Protein accessionYP_737843 
Protein GI114047293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.14335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATA CCAAAAGTAA CGATGTTCTA AACACTATTC TGGAAAAAAT TGAGCTGCCA 
GACAGTGCTT ATGAAAAGGC TGAAAAGCGC TATAAGGATC TAGGTGATTG GTTACATCGC
CCTGAATCAA CATGCGGTAT TTTTGATCCC CACGTGTTTT CTCAAGGTTC CTTTCGGCTA
GGTACAGCGA TTAGACCCGA TTTAGAAGAA CAGTATGATC TAGACATGGG GTGCAACCTT
CGGCGTGGCC TGGATAAAAG TTCCATCACT CAAAAGCAAT TAAAGTACCT AGTCGGTCAT
GAGTTAGAGC TCTATCGAAA CGCCAGAGGC ATTAAGGAAG ATCTGGCGGA GAAAAAACGT
TGTTGGCGCT TAGAGTATGC CGATGGGCTG AGCTTTCATA TGGATATAGT CCCTTGTTTA
CCAGAAAGTG ATACAGGAAG AGGCCTTTTG AAAAGGCGAA TGGTCGAGAA CTCTAAGTTT
GATGAAAGCT TGGCTCAAAA CGTGTCTCAG CTTGCAGTTT CGATTACCGA CAACACAGAT
CCCACTTACG CAGTTGTGAA TGAAAACTGG CGTATCAGCA ATCCTGAAGG ATATGCTCGA
TGGTTTGAAA CGCGCATGAA GACGGCACGT TTAGTAATTA ACGAACGTGA AATGCGATTT
AAAGCCAGTA TAGATAGTCT ACCATACTAT CAATGGAAGA CACCCTTACA GCAGGTTATC
CAATTATTGA AGCGTCATCG TGACACTATG TTTAAGAACA ATGTGGATAG TAAGCCAATA
TCGGTAATCA TCACCACATT GGCTGCTAAA TCATATAAAG GTGAAAGTGA TTTGGCTTCA
GCGTTGAATA CGGTGCTCTC CGAGATGGAT AACCATATTT CTGCACAAGC GCCAATGATT
CCGAACCCAG TCAATCCCGC CGAAGATTTT GCAGACAAGT GGTATGACGA AAAATCTGCT
CAATACCGAT TGCAAGAAAA CTTTTATAAA TGGCTGTATC AAGCTAGAGC TGATTTTAGT
GCTCTTTGCT CGAGTGATGA TACGCAACGG ATAGTAAATG CGGCGCAAAA TGGTTTGGAT
CTGAAGCTTG ATTCAAATTC GGTAGCGCGT ATCTTGGGTA TCCCTGCGGT GACAGCAAAA
CCAACGTTCG CAATTCAATC ATCTGACCCA AAACCATGGT TTAAGCAATA G
 
Protein sequence
MSNTKSNDVL NTILEKIELP DSAYEKAEKR YKDLGDWLHR PESTCGIFDP HVFSQGSFRL 
GTAIRPDLEE QYDLDMGCNL RRGLDKSSIT QKQLKYLVGH ELELYRNARG IKEDLAEKKR
CWRLEYADGL SFHMDIVPCL PESDTGRGLL KRRMVENSKF DESLAQNVSQ LAVSITDNTD
PTYAVVNENW RISNPEGYAR WFETRMKTAR LVINEREMRF KASIDSLPYY QWKTPLQQVI
QLLKRHRDTM FKNNVDSKPI SVIITTLAAK SYKGESDLAS ALNTVLSEMD NHISAQAPMI
PNPVNPAEDF ADKWYDEKSA QYRLQENFYK WLYQARADFS ALCSSDDTQR IVNAAQNGLD
LKLDSNSVAR ILGIPAVTAK PTFAIQSSDP KPWFKQ