| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1784 |
|---|
| Symbol | |
|---|
| ID | 4258508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2103968 |
|---|
| End bp | 2104846 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638122443 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_737834 |
|---|
| Protein GI | 114047284 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.288665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACGG TAAATCATCA AACCAACAGG ATTAGTCCTG TTAAGACGAA GAGATTCAGT
GAGTTGGGCT TTACTGAGCG CAAGCATCTT CAGGAATGGT TGACACACGA GCCTTCCGCA
CTGGGTGAAG AGCTGCTGAT TATTCAAAAG GAGTTTGATG GCTTTGATGA TACCCGAGAA
CGCTTAGATT TACTGGCACT GGATAAAGAT GGCAACTTGG TCATTATTGA AAATAAGCTG
GACGACAGTG GCCGAGATGT GGTGTGGCAG GCGCTTAAAT ATGCCTCGTA CTGTGCCAGT
TTAACCAAAG CGCAAATCGT TGAGATTTAC CAGCAGTACT TAGACCGCTA TGAGCCTGTA
ACAGGAGAGG TTGACCTGTT AAATGCCCCT GCAAGTGCCT CGGCGAGAAT ATGTGAGTTT
TTGGATGCGC CCGATGTGGA TGAGTTAAAG CTCAACCTGG GTAACAGCCA GCGCATTATG
TTAGTTGCGG CAAACTTTCG CAAAGAAGTG ACCAGCACCG CGCTGTGGTT ATTGGGTCAA
GGCATTAGCA TTGCCTGCTT CAAAATCACT CCTTATTCAC TGGGTGAACA GCTACTGATT
AATATTGACC AGATCATTCC AACGCCAGAA GCGAAAGAGT TGATGATCGG TATTAATGCC
AAGGAAGCGG AAGAAAAAAC CACCGAAGTG GTCCTTAAAA ACCGCCATAC GGTGCGTCGC
GAGTACTGGG AGCGTGCCTT AGAGGCGTTT CAGAAAAGCT CTTGCCAACT CTATAACAAC
ATCAGTACTA CCAAAGATCA TTGGTTATGC GCGGGCTCTG GCGTAACAGG CTGTCCATTT
AGCCTTTGGC AAGCCGCTCG AATGGCTTCG TCTCGATGA
|
|---|
| Protein sequence | MFTVNHQTNR ISPVKTKRFS ELGFTERKHL QEWLTHEPSA LGEELLIIQK EFDGFDDTRE
RLDLLALDKD GNLVIIENKL DDSGRDVVWQ ALKYASYCAS LTKAQIVEIY QQYLDRYEPV
TGEVDLLNAP ASASARICEF LDAPDVDELK LNLGNSQRIM LVAANFRKEV TSTALWLLGQ
GISIACFKIT PYSLGEQLLI NIDQIIPTPE AKELMIGINA KEAEEKTTEV VLKNRHTVRR
EYWERALEAF QKSSCQLYNN ISTTKDHWLC AGSGVTGCPF SLWQAARMAS SR
|
|---|
| |