Gene Shewmr7_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1670 
Symbol 
ID4255090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1969069 
End bp1969500 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content49% 
IMG OID638122329 
ProductMarR family transcriptional regulator 
Protein accessionYP_737721 
Protein GI114047171 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00529848 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACCGTT ATGAAAGCTT AGGCTATCTT GTTTCCCACT TGAATATTGA GCTGCAAAAT 
GAGCTCGATT TACAGTTGAA ACGCTATCAG CTCGACATTA AGTTGTGGCC AGTGTTGTTC
GCGCTTTGGC AGGAGGAGGG GATTACTCAG ACCGAGTTGT CTAAGCGTTG TGATGTGGCG
AACTATACCA TGACCCGTCT GCTCGATCAG TTGCAGGTGC AGGGTCTCAT CACTCGCCAT
CAAGAGCTCG ATAATCGCAG AGCTTTCCAG ATTTTTCTCA CCGATGAGGC CAAGGCGCTG
GAGCAGGATT TGATCCGCGA GGCCGAGCGC GTCAATGAAA AATACTTGTC CAATCTCACT
GAAGAGGAAC GCCAGCAGTT TATGCGCTTA CTCAATAAGA TAAACCGCTT ACCGTCACTG
GCTGCGTTGT GA
 
Protein sequence
MNRYESLGYL VSHLNIELQN ELDLQLKRYQ LDIKLWPVLF ALWQEEGITQ TELSKRCDVA 
NYTMTRLLDQ LQVQGLITRH QELDNRRAFQ IFLTDEAKAL EQDLIREAER VNEKYLSNLT
EEERQQFMRL LNKINRLPSL AAL