| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1477 |
|---|
| Symbol | |
|---|
| ID | 4257754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1719321 |
|---|
| End bp | 1722110 |
|---|
| Gene Length | 2790 bp |
|---|
| Protein Length | 929 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638122126 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_737533 |
|---|
| Protein GI | 114046983 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.602507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.234952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAAGCCT CTCAGTCTAT TTACAAAAGT CCAAACGATC ATCGTCAGTA CCGTTATCTC
GTATTAGATA ATGCCCTCAG AGTATTATTG GTCGAAGATT TGGACGCCAG CCAAGCCGCC
GCTTCCATGG CGGTGGCCGT AGGACATTTT GATGATCCTG TGGATAGACC CGGTATGGCG
CATTTTTTAG AGCATATGCT CTTTTTAGGC ACAGAAAAAT TCCCCGACTC CGGTGAGTAT
CACGCCTTTA TCAATCAGCA TGGCGGCAGT AACAATGCGT GGACCGGCAC AGAGCACACC
AATTTCTTTT TTACCATCAA CGCTGACGTA TTTGCCGACT CCCTAGACAG ATTTAGCCAA
TTCTTTATCG CCCCCAAATT TGACCTCGAC CTGGTCGATA GGGAGCGCCA AGCGATTGAA
TCTGAATTTA GTTTAAAGCT GAAGGACGAT ATCCGCCGCA CCTATCAAGT GCTTAAAGAA
ACCGTCAATC AACAGCATCC GTTTTCGAAA TTTTCCGTCG GCAATTTAGT CACCCTTGGC
GGAGAACAGG CGCAGGTCAG AAGCGAGCTA TTGGCGTTTT ATCAAAGCCA TTACAGTGCC
AATTTAATGA CGCTCTGTTT AGTCGCGCCT ATGCCGTTAG ATGAGCTTCA GGCGCTGGCG
GCCCAATATT TCAGTGCGGT CCGCAACTTA AACTTAGTCA AACAGTATCC TGATGTGCCG
CTGTTTTCAG AAAATGAACT GCTTAAGCAA ATCAATATTG TCCCTTTAAA GGAACAAAAG
CGTTTAAGTA TCAGTTTTAA CTTCCCTGGC ATCGACCACT ACTACAAACG CAAGCCGCTG
ACCTATATTA GCCATATCCT CGGCAATGAG AGTAAGGGTA GCCTACTGTC GTATCTTAAA
GAACAGGGGT TAGTGAATAA TCTCTCCGCG GGCGGCGGAG TCAATGGCTA TAACTTCAAG
GATTACAGCA TTGGCCTACA ACTGACCGAC AAAGGCTTGG CCAATATTGA CGATATTGTC
TGTAGCTGTT TTGAATATAT CGAGCTGATA AGGACGCAAG GCCTTGAGGA TTGGCGCTAT
CTAGAAAGAG CAAACCTGCT CAAAATGGCA TTTCGCTATC AGGAGCAGGT GAAATCCCTC
GATTTAGCCA GCCACTTAAG CATCAACATG CACCACTACG AAGTGGAAGA CTTAGTCTTT
GGTGACTATC GCATGGATGG CTTAGATATT AGCGAAACCC TTGAGCTATT GAGCTTAATG
ACGCCGCAAA ATATGCGCTT GCAACTCATA GCACAGTCCG TTAAGACCGA CCGCAAAGCC
AATTGGTACC ATACGCCATA TCAAGTCTTA CCGATAAAAC CCGAATCCCT TGCCCGGTGG
CAAGTGACAC AAATTCGCCC AGAGTTGCAA TTGCCCGCTG CCAATCCCTT TATTGTGGCC
GACTCCATTG CTCGGCCCGA TAAAAGTGAA GTCGCCGTGC CTGTGATTGT CGCGGAATCA
ACGGGATATC GGATTTGGCA TAAAAAGGAC GATGAGTTTA ATGTCCCCAA AGGCCATATG
TACCTATCCC TCGATTCGGA ACAGGCGAGT AAAACCCCAA AACATGCTGC CCTCACCCGC
TTATACGTTG AGATGCTGCT CGATTACTTA ACTGAGCCCA CTTACCAAGC GGAAGTCGCT
GGACTTAGCT ATAACATTTA CCCCCATCAG GGTGGGATCA CCCTGCATTT GTCTGGTTTC
ACGGGGAATC AAGAAACACT GTTAGCCCTG CTTATCCATA AAGCAAGAGA ACGTAATTTC
ACCGAAGAAC GGTTTGCGTT AATTAAATCT CAGCTACTGC GTAGCTGGCA AAACTTGGCG
CAAGCCAAAC CGATTTCGCA ACTATTCACG AGCTTGACTG CCACACTGCA AAAACGCAGC
TACGAGCCTG CTCGCATGGC GCAGATGCTG GAAAATATCA CCTTAAATGA TCTGCATAAC
CATGTACGCG CCTTTTACGA GAAGATTTAC CTCGAAGGGC TGATTTATGG CGATTGGCTT
GTATCAGAGG CGCAAGCCTT AGGAAAACGA CTGGAACATA TCTTGTCCCT CGTCTCTAGC
CCAAGCGCAG AGTCGACCCG TGAATTAATC AACTTAACCG GGCAAGGCAC CCTCCTTCGG
GAATTGGCGA TAGACCATCA AGACAGTGCG ATTATAGTGT ATTATCAATC AGCTATAGCA
ACGCCTGAGA AAATGGCGCT GTTTAGCTTA CTCAACCACA CTATGTCTTC GACCTTCTTC
CATGAGCTAC GTACCGAAAA ACAGTTGGGC TACATGGTGG GCACAGGTTA TCTGCCACTC
AATCGTCATC CGGGACTCAT TTTCTATATT CAATCCCCGA CAACGGGGCC ACTGCATTTA
TTAGAGGCTA TTGATGAGTT TATCGCGGAT TTTAATTATG CCGTGATGCA AATTACCAAT
GAAGAATGGG AAAGCACCAA ACAGGGACTC ATCAATCAAG TGATGGAACA TGATGCTAAC
CTCAAAACCC GTGGACAGCG TTATTGGGTA AGTGTAGGCA ACCGTGATTA CCAGTTTAAT
CAGCGTGAAT TAGTGGTCGC AGAAATCAAC AAACTCACTC GCCCTGATCT TATAAAGTTT
ATGATGCGAA AAATGCGCAC TAAGCATAGC GATAGACTGG TGCTTTTTAG CACAGGTTCT
GCCCATGCGG CGCAGTCAGC GCTCAAATCA GAGAATATGA TTACCGATCT TAAACTCTTT
AAACAAAACA CTGAAAAGTT CAATTTTTAG
|
|---|
| Protein sequence | MQASQSIYKS PNDHRQYRYL VLDNALRVLL VEDLDASQAA ASMAVAVGHF DDPVDRPGMA
HFLEHMLFLG TEKFPDSGEY HAFINQHGGS NNAWTGTEHT NFFFTINADV FADSLDRFSQ
FFIAPKFDLD LVDRERQAIE SEFSLKLKDD IRRTYQVLKE TVNQQHPFSK FSVGNLVTLG
GEQAQVRSEL LAFYQSHYSA NLMTLCLVAP MPLDELQALA AQYFSAVRNL NLVKQYPDVP
LFSENELLKQ INIVPLKEQK RLSISFNFPG IDHYYKRKPL TYISHILGNE SKGSLLSYLK
EQGLVNNLSA GGGVNGYNFK DYSIGLQLTD KGLANIDDIV CSCFEYIELI RTQGLEDWRY
LERANLLKMA FRYQEQVKSL DLASHLSINM HHYEVEDLVF GDYRMDGLDI SETLELLSLM
TPQNMRLQLI AQSVKTDRKA NWYHTPYQVL PIKPESLARW QVTQIRPELQ LPAANPFIVA
DSIARPDKSE VAVPVIVAES TGYRIWHKKD DEFNVPKGHM YLSLDSEQAS KTPKHAALTR
LYVEMLLDYL TEPTYQAEVA GLSYNIYPHQ GGITLHLSGF TGNQETLLAL LIHKARERNF
TEERFALIKS QLLRSWQNLA QAKPISQLFT SLTATLQKRS YEPARMAQML ENITLNDLHN
HVRAFYEKIY LEGLIYGDWL VSEAQALGKR LEHILSLVSS PSAESTRELI NLTGQGTLLR
ELAIDHQDSA IIVYYQSAIA TPEKMALFSL LNHTMSSTFF HELRTEKQLG YMVGTGYLPL
NRHPGLIFYI QSPTTGPLHL LEAIDEFIAD FNYAVMQITN EEWESTKQGL INQVMEHDAN
LKTRGQRYWV SVGNRDYQFN QRELVVAEIN KLTRPDLIKF MMRKMRTKHS DRLVLFSTGS
AHAAQSALKS ENMITDLKLF KQNTEKFNF
|
|---|
| |