Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1464 |
Symbol | |
ID | 4255626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1700864 |
End bp | 1701568 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638122113 |
Product | hypothetical protein |
Protein accession | YP_737520 |
Protein GI | 114046970 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.395577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.001985 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGAGC TTAAATTTAG ACGTCAAGCT TATGAAGATC CTCATAATCA AGATCCCGAG TTTGTTGCAC AAATGCAGGA AAGCGCAGAA AACCAAGCAT TTGTCGCAGA ACTTAAAGGC CTAGATGCCA AAATCAGTCA CGCATTAAAA GTGGATGTGC CAGAGGACTT GGCCGACAAA CTTATCCTGC GCCAACAACT GCAGCAACAC CATAAACAGC GCCGTCAAAC GGGCTTTTTA GTGGCCATGG CCGCGTCGAT TGCCTTTATT GTGGGGATCA GTTTCAGTTT ATTGCGTTTA GGCCCAGTGG ATTTAGCCGA GCATGCCTTA GCCCATGTTA ACCATGAAGG TGTGGCCTTG CAGGTAGATC AGAATGTCAA CTTTAGCCAA GTGAACGCGC AGCTCGCCTC CTTAAAACAC TTAGAGCATG CCAAATTTAC CGAGCAACCA GGTAAGGTCT ATTACACCTC TTACTGTGAT TTTCAAGGGG TTAAGAGCTT ACATCTAGTG CTGCAGGGCG AAAAAGGTAA AGTCACCCTA TTTATTGTGC CAGTTGAAAA ACGCATGGTG CTGGATAACA CCTTTGCCGA TGGTAAATAC CAAGGCATGG GCTTTGAGGC CGGTGATGCC TACATTTTGC TTGTGGGTGA AAATCAGGCC GACCTTAGCT TCGTAAAAGA CGAAATCAAG AACACTTTTA TCTAA
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Protein sequence | MDELKFRRQA YEDPHNQDPE FVAQMQESAE NQAFVAELKG LDAKISHALK VDVPEDLADK LILRQQLQQH HKQRRQTGFL VAMAASIAFI VGISFSLLRL GPVDLAEHAL AHVNHEGVAL QVDQNVNFSQ VNAQLASLKH LEHAKFTEQP GKVYYTSYCD FQGVKSLHLV LQGEKGKVTL FIVPVEKRMV LDNTFADGKY QGMGFEAGDA YILLVGENQA DLSFVKDEIK NTFI
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