| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1426 |
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| Symbol | |
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| ID | 4258542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1655350 |
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| End bp | 1656747 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122060 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_737482 |
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| Protein GI | 114046932 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0870097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.820962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATTG CGACCCTCTT TACTGCCCTA CTCGTCTGTA TGTTTTTAGG TATGCCTATC
GCGATTGCGT TAGGTTTCTC GAGCATGCTG ACGATTTTAT TCTTCTCCAA CGATTCCCTC
GCCTCTGTGG CGTTAAAACT TTATGAGTCA TCGTCAGAGC ACTATACCCT GCTGGCGATC
CCCTTCTTTA TTCTGTCCTC AGCCTTCCTG TCAACCGGTG GAGTGGCACG ACGGATCATC
GATTTTGCGA TGGACAGTAT CGGCCATATC CGTGGTGGTT TAGCCATGGC CTCAGTGATG
GCCTGTATGT TGTTTGCCGC GGTGTCAGGT TCATCGCCCG CGACTGTGGC CGCCATTGGC
TCGATTGTTA TCGTCGGCAT GGTAAAAGCG GGTTATCCCG AAAAATTTGC CGCTGGCGTC
ATTACCACTT CTGGCACCTT AGGGATTTTG ATCCCACCTT CAATCGTAAT GCTAGTGTAT
GCGGCAGCGA CGGAAGTGTC GGCAGCCAGA ATGTTTATGG CGGGCTTAAT CCCAGGTTTG
ATGATGGGCT TCCTGCTGAT GATAGTGATT TATATCGTCG CCCGTTTTAA AAATCTGCCA
TCACGCCCCT TCCCCGGCTT TAAGCAACTG GGTATTTCCA GTGCCAAAGC CTTAGGCGGT
CTGGCGCTAA TTCTTATCGT GTTAGGTTCA ATCTACGGCG GTGTGGCCAG TCCAACCGAA
GCCTCTGCCG TAGCCTGTAT GTATGCCTAT TTCATTGCGG TATTTGGTTA TCGCGATATT
GGCCCATTGA AAAATGTCGC TTGGCGTAAC CCTAATGAGC CCATCCCCAG CGCCATTGCA
CGCAACTTAG GCCATATGGT GCTCGGGCTG ATTAAAACCC CAATCGACAA AGAAATTCGC
CACGTGGTGC GCGACGGGGC AAAAGTCAGC ATCATGCTAC TGTTTATCAT TGCCAACGCA
ATGTTATTCG CCCACGTGCT GACCACTGAG CGTATTCCCC ATATTATTGC CGAATACATT
GTGAGCATGG GCTTACCTGC TTGGGGCTTC TTAATCATTG TTAACTTATT GCTGTTAGCG
GCGGGTAACT TTATGGAGCC ATCGGCCATC GTGTTGATTA TGGCGCCAAT CCTGTTCCCG
ATTGCGACTC AGTTAGGTAT CGATCCTATC CACTTAGGTA TCATCATGGT GGTGAACATG
GAGATTGGCA TGCTCACACC GCCAGTGGGG CTTAACCTCT TCGTGACGGC GGGGATCACA
GGCCGCAGTA TCGGCTGGGT GATCCAATCT GTACTACCGT GGTTAGCACT GATGTTGGCC
TTCTTGGCGC TTATCACCTA CGTGCCACAA ATCTCCCTGT TCTTGCCGGA ATTTCTGGAT
AAGCTCAACG GATATTAA
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| Protein sequence | MAIATLFTAL LVCMFLGMPI AIALGFSSML TILFFSNDSL ASVALKLYES SSEHYTLLAI
PFFILSSAFL STGGVARRII DFAMDSIGHI RGGLAMASVM ACMLFAAVSG SSPATVAAIG
SIVIVGMVKA GYPEKFAAGV ITTSGTLGIL IPPSIVMLVY AAATEVSAAR MFMAGLIPGL
MMGFLLMIVI YIVARFKNLP SRPFPGFKQL GISSAKALGG LALILIVLGS IYGGVASPTE
ASAVACMYAY FIAVFGYRDI GPLKNVAWRN PNEPIPSAIA RNLGHMVLGL IKTPIDKEIR
HVVRDGAKVS IMLLFIIANA MLFAHVLTTE RIPHIIAEYI VSMGLPAWGF LIIVNLLLLA
AGNFMEPSAI VLIMAPILFP IATQLGIDPI HLGIIMVVNM EIGMLTPPVG LNLFVTAGIT
GRSIGWVIQS VLPWLALMLA FLALITYVPQ ISLFLPEFLD KLNGY
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