Gene Shewmr7_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0947 
Symbol 
ID4256249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1084689 
End bp1086164 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content51% 
IMG OID638121558 
ProductN-acetylglucosamine-binding protein A 
Protein accessionYP_737003 
Protein GI114046453 
COG category[S] Function unknown 
COG ID[COG3397] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.809737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0565044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACATC TAACTGCTTT TACATCAATC AGAAATGCTA ACCACAAACA CCCACAACTG 
GCTCGTTTAA GCCTAATTGC CTTGGCCCTA AGCGCTACGA GTGCGCTAGT TAGCCAAACG
GCGTCGGCCC ACGGTTATGT GGTTTCACCA GAATCACGCT CGTACGCCTG TAAAACTGGC
AGCAATTTAA ATTGCGGCGC CGTTCAGTGG GAACCGCAAA GTGTTGAAGG CCCATCAGGT
TTTCCGGAGT CAGGCCCTGC CGACGGCAAA ATTGCCAGCG CAGCCAACGC GGCGTTTTCT
CCCTTGGATG AACAGAGCCC GAGCCGTTGG TCTAAGCATG ACATTAAGCC GGGTTGGAAT
GACTTTAGCT GGCAGTTCAC CGCTAACCAT GTGACCCGCA ATTGGCGTTA CTATTTAACT
CGTCAAGGCT GGGATCAAAA CCAAGCCTTG AGCCGTACAA GCTTTGACTT AGCCCCCTTC
TGTGTGGTCG ACGGTGGCAT GGTGCAGCCG CCTAAGTTAG TGACACATAA CTGTTATGTG
CCTGAAGGCA GAAGCGGTTA TCACGTGATT TTGGCCGTGT GGGAAGTCGG TGATACCACC
AACAGTTTCT ATAATGCTAT CGATGTGAAC TTTAGCTCTG GTGTTGTGGT GCCGGGCGAG
TGGACCGATA TTGGCGATAT CAATCCGTCA CTCGATCTTA AGGCGGGTGA TAAGGTGATG
ACGCGGGTGT TTGATGCTAA TGGCGAGCAA ACTGCCAAGC AAACTCAGAT AACCATTGCC
GACACGACTC AAGGCGCCAA GCAAAATTGG CCATTCCTGT TAGCCAGTGC CATTAATGCC
CAGCAGCCAC AGCTTAAGGC GGGGCAGAAG AATGCTTCTG GGGTGATCTC GCCCGTTTAC
GGTAAAAATG AGATTTATGC CGCGCCTAAT TCGGGCCTAG AGCGAGTGGA AGTGAGCTTT
GATATTGCGC CTGCGCCGGG TAATCAGCTC GATGTCACGT CACTGGCCGA TGATTACACC
ATTGTCGATG GTGCCGCAAA GGTCAGCTTC GATGTCAACA CCAATGCGGA TATGCAGGTC
TCGGCTTACC TATTTAGCCA CGATGGCACG GCAGCTGGTT ATGTCACACA AGCGGTCAAT
AATACCAGCG CGAGTCTAGT GCTTGATGTC GTTGCGCCAA AGGCTGGTCA TTATCACTTA
CAAGTGAAAG GCGAGCCGAA GCAAGGTGAG GTCATCCAGC AAAACTTCGA TCTGTTCTTA
AAAGATCAAG CCACAGCGCC CGATGCCGAT TTTGTCTTCC CCGAGGGCAT TAAAAACTAT
GTGGCGGGTA CTAAAGTGCT GCAACCTAAA ACTGGCAAGG TCTATCAATG TAAACCTTGG
CCTTACAGTG GTTATTGCAT GCAATGGTCG CCAACTGCAA CCGGGTTTGA ACCGGGTGTC
GGCGGCTCTT GGAATATGGC TTGGACTGAG CTGTAA
 
Protein sequence
MAHLTAFTSI RNANHKHPQL ARLSLIALAL SATSALVSQT ASAHGYVVSP ESRSYACKTG 
SNLNCGAVQW EPQSVEGPSG FPESGPADGK IASAANAAFS PLDEQSPSRW SKHDIKPGWN
DFSWQFTANH VTRNWRYYLT RQGWDQNQAL SRTSFDLAPF CVVDGGMVQP PKLVTHNCYV
PEGRSGYHVI LAVWEVGDTT NSFYNAIDVN FSSGVVVPGE WTDIGDINPS LDLKAGDKVM
TRVFDANGEQ TAKQTQITIA DTTQGAKQNW PFLLASAINA QQPQLKAGQK NASGVISPVY
GKNEIYAAPN SGLERVEVSF DIAPAPGNQL DVTSLADDYT IVDGAAKVSF DVNTNADMQV
SAYLFSHDGT AAGYVTQAVN NTSASLVLDV VAPKAGHYHL QVKGEPKQGE VIQQNFDLFL
KDQATAPDAD FVFPEGIKNY VAGTKVLQPK TGKVYQCKPW PYSGYCMQWS PTATGFEPGV
GGSWNMAWTE L