Gene Shewmr7_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0896 
Symbol 
ID4256548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1026383 
End bp1028119 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content46% 
IMG OID638121507 
Producthypothetical protein 
Protein accessionYP_736952 
Protein GI114046402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TTGTTATTGC TGCGGCGATT ATTGCAGCGG GTGCGGGGGC TTATTGGTAC 
ACTCAACACG GAAGTAGCTC GAGTGCTTCG GCCAATCTTT TGCTAGATTA TGTTCCTGCC
GATACCCCAG TGTTTTCGGG CCAGTTAAAA CCTTTCCCCC TGAAAAACTA CCTGCAATCC
ATTTCTGGCA ATTACCAGCA ATATTCAACC GATTCGTTGG CCGAGTTAGG CGATTTAGAC
AGCCCAATGG CCAAGTTTTT TGTCAGCATC TATACACAGT ATATGGATGG GATGAAAGAT
CCTACCCAAT TGCTTAAGAC CTTTGGTTTG CCAAATGAAG TCGAGCCTTT TTTCTATACT
TTAGGTGTGA TCCCTGTCCT TAAAATCAAT GTGAATCAAG TCGATGCGTT TTGGACTGTA
TTGGATAAAG CCGAGCAAGA CAGCGGTTTC ACCCATGAAA AGCGCACCTT AGCGGGCGTT
GATTATCGCG CTTATTCACT CGCTGAAGAA GGTTCTACTG AGAAGGTTGA CCTGTTATTT
GCCCATAAAG ATGGCATCTT AACTGTGACC TTATCTGGCA CAACAATTGA GCCAGAAATC
TTAGAAATGG CCTTTGGATT AAAGAAACCG ACTCAATCCT TAGCCGCTTC AGGCATGCTG
AAAGACATCA TCAAAACCCA TGGTTTTATG GAAGACAGCA TCAGCTTTAT CAACCACGTT
GAGATTGTTA AAGCGATTAC GTCTCCCGAT GGCAATATGC TAGGCAAACA GCTCACTCAA
TTCATGGCTG AAGAAAACCA TGGTGAAGAT CCGTTAGCGG AAATCCGTAC TCCTGAGTGC
AAAACTGAGC TAACCGCCAT TGCGGCCAAC TGGCCTCGTA CGGTTGCGGG ATTAACGGCA
TTTAGTTCGA CTGAAAAAGA AAGCCATATG GCGGCCTCTT TTGTGGTTGA AAGCAAAAAC
CAAGCAATCC TAACTGCGCT GCAAAAAATG CGCGGCTACA TTCCAACCCA CTTAGCTGAC
ATTAACAGCA CTATCTTCTC GATGGGATTG GGGATTGACG TTAATGAAGT TGCGCCTTCA
CTGACGGCGA TTTGGGACGA TCTGCAAAAG CCACAGTTAA CCTGTGCGCC GCTTGCTGAG
TTACAGGCCG AATTAAGCCA ACAAAGCCCT GCGATGCTGG GTATGTTTAC TGGCATGGCT
AACGGCGTTA AAGGTGTGAG CCTGTCATTG CTCGATTATA AGATGAGCTC TCAAGACCAA
GAGCCTAAGC TTGAAAGCTT AGATGCCTTA GTGAGCTTAA CGGCCGATAA CCCATCAATG
CTGTTCAACA TGGTGAAACC TTTTGCTCCA ATGCTGGCTG AACTGCAAGT TGCTGATAAT
GGCGAGCCTA CCGATTTATC ACCACTGTTA ATGTTGCCGC CTGAGATGAA CATCAAGCCG
ATGTTGGCCA TTAAGGGACA ACACTTAGTG GTTTACTCTG GCGATAAAGG CTTAGCCTTA
GCCAATAAAC TGGCTGGCGA AAAGCCATCG GCCAATGGGC TTTACAGCAT GTCGGCTGAC
TACGGTAAGA TGTTTACCCC AGTGTTAACG CTATTAGAAC TGACTGGCGA GCCGATTCCT
GAAGAGCTGC AAGCGCTGAA AGATTACAAT ATGCGCGTCC AAATGAGCTT CGATGTGAAT
AAACAGGGCT TAGTGTTTGG TTCAGTGATG AACTCAAAGG CGAGCGAGAA GAAGTAA
 
Protein sequence
MKKIVIAAAI IAAGAGAYWY TQHGSSSSAS ANLLLDYVPA DTPVFSGQLK PFPLKNYLQS 
ISGNYQQYST DSLAELGDLD SPMAKFFVSI YTQYMDGMKD PTQLLKTFGL PNEVEPFFYT
LGVIPVLKIN VNQVDAFWTV LDKAEQDSGF THEKRTLAGV DYRAYSLAEE GSTEKVDLLF
AHKDGILTVT LSGTTIEPEI LEMAFGLKKP TQSLAASGML KDIIKTHGFM EDSISFINHV
EIVKAITSPD GNMLGKQLTQ FMAEENHGED PLAEIRTPEC KTELTAIAAN WPRTVAGLTA
FSSTEKESHM AASFVVESKN QAILTALQKM RGYIPTHLAD INSTIFSMGL GIDVNEVAPS
LTAIWDDLQK PQLTCAPLAE LQAELSQQSP AMLGMFTGMA NGVKGVSLSL LDYKMSSQDQ
EPKLESLDAL VSLTADNPSM LFNMVKPFAP MLAELQVADN GEPTDLSPLL MLPPEMNIKP
MLAIKGQHLV VYSGDKGLAL ANKLAGEKPS ANGLYSMSAD YGKMFTPVLT LLELTGEPIP
EELQALKDYN MRVQMSFDVN KQGLVFGSVM NSKASEKK