Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0849 |
Symbol | |
ID | 4257110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 966511 |
End bp | 967284 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638121460 |
Product | LemA family protein |
Protein accession | YP_736905 |
Protein GI | 114046355 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.133661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAGT TGATAGGCGA TGCCGATCAG ATCTGCGGCT ACGGTTTTAG TTCAACCTAT TTAGGAAACA AAGTCCTGTT TTGCGCATTT GCTGTTTGGT CAATTTTTAC CTACAACTCA TTGCAATCTA AAAAGCAATC TCTGGTTGAA CAAGCCTCCA ATATTCAGGT TTCTTTGCAA AAACGAAGAG ATTTGGCATC AAGAGTGATC GATATTGCAC AAGGTTTCGG CGATCATGAA AAGTTAACAC ATCTTAAAAT ATCAGCAGAT CAGCAAGCCA GTACCCAATC TTTGGCCGCG TTGTCACAAA GCTTCCCTGA GTTGAAAGCA AATGAAACCT ATTCCAAGCT TATGAAGCAG TTGGAAGACT TAGAAGATAA CATTGCGGCT AAGCGTGAGA CTTATAATAA GCATGTGAAT ATTTACAATA GTTACCGCTC TAGCTTTCCC ACTATGTTAG TGGCAAATAA GCTGAGTTTT GATCCAGCAC CTTATTATAA TGCTGATAAC GAGGATACCT TGAGCTCTCT CGCGATTTTC AATCGTGATG ATTCGGAAGC GGTGAAAAAT TTGATTAACA CCTCGTCACA AACCTTGAAG TCCTCTGCAA AATACCTCAA GGCCTCTGCG ACCACGCATA TCGAGAATGC TAAACAATCG GAAACGTTTA AGTCAGTTGT TGACCAAGGT GATATAGCCA TTACTAAGGT AGTTGAAGCT GCTAAAACAA AGATAGAAAA AAAGGAATCA GCCGCAGCAG AGAAAGAAGA ATAA
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Protein sequence | MGKLIGDADQ ICGYGFSSTY LGNKVLFCAF AVWSIFTYNS LQSKKQSLVE QASNIQVSLQ KRRDLASRVI DIAQGFGDHE KLTHLKISAD QQASTQSLAA LSQSFPELKA NETYSKLMKQ LEDLEDNIAA KRETYNKHVN IYNSYRSSFP TMLVANKLSF DPAPYYNADN EDTLSSLAIF NRDDSEAVKN LINTSSQTLK SSAKYLKASA TTHIENAKQS ETFKSVVDQG DIAITKVVEA AKTKIEKKES AAAEKEE
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