| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0807 |
|---|
| Symbol | |
|---|
| ID | 4256407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 918122 |
|---|
| End bp | 919522 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638121418 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_736863 |
|---|
| Protein GI | 114046313 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAC AGACACCCGC ACTTAACACT AAAATCGAGC GCAGCACAAA TACCCAAACC
AGCCAGCACG CAAAGTCCGC GAAGCCAAAC GCCCATTATT CAAAATTGGG TTATCAGGCA
TTATTAGCGC TGTTCGCCAG CGGTTTTGCG GGCACAGCGT TGGCCGATGA GGCGCAGCTC
AGCGGCGCCA ACACAGCATG GATTTTAAGC TCATCAGCCC TCGTCCTATT GATGACACTC
CCAGGGCTGG CGCTGTTTTA CGGTGGTCTA GTGCGCAGTA AAAACGTGCT ATCGATTTTA
ATGCAGTGTT TTTCTATCGC CGCTATCGCC TCCGTGCTGT GGTTTGTGGT GGGTTACTCT
ATCGCCTTCG ATACCGGCAA CGGGTTTATC GGCGGGCTTG GCAAAGCTTT TCTAGCCAGC
ATTGGTCGCG ATAGTGTCAG TGGGGATATT CCCGAACCTT TATTTATGCT TTTCCAGATG
ACCTTCGCGA TTATCACGCC AGCGCTGATC ATCGGTGGTT TTGCCGAGCG GATGAGGTTC
TCCGCCGTAC TGATGTTTTC AAGCGCTTGG TTGCTGTTAG TCTATGCACC TATCACCCAC
TGGGTATGGG GCGGCGGCTG GTTGGCCGAG CTTGGGCTGT ATGACTTTGC TGGCGGTACA
GTCGTACACA TTACCGCTGG GGTAGCGGCA CTGGTGGCGG CAAAAGTGTT AGGGCCGCGT
AAGGGATTTT TAAACTCGGC CATTATGCCC CATAACTTGA CCATGACAGT GACAGGCGCG
GGCATGCTGT GGGTAGGCTG GTTTGGCTTT AATGGCGGCA GCGCCCTAGG CGCCAATGGC
ACTGCGGCAA TGGCGATTCT CGCGACCCAT TTAGCCGCCT CGATGGGCGC TATCACGTGG
GCAGGGATCG AGTGGTATAA ATTCGGTAAG GCCAGTGCAC TCGGTATCGT CACCGGCATG
GTGGCAGGCC TTGGTACTAT CACTCCTGCA TCGGGTTATG TCGGCCCTGC TGGCGCGTTA
GTTATCGGTT TTCTTGGCGG CGTGGTTTGC TTCTTTTCAA CTGTGTACAT TAAACAAAAG
CTTAAGATTG ACGACTCACT CGATGTGTTC CCAGTGCATG GTGTCGGCGG TATTCTCGGT
ACTTTGCTGG CGGGGGTATT TAGTTCGACT CAGCTTGGGA TCTTCAGCGG TTATGGCTTT
GCCAGTGTGA ACCACACTAT GCTCGACCAA CTCGGGGCGC AAGCCATTGG CGTTATCGCT
ACGTTCACCT ATACAGCGAT TGTAACTTGG TTATTGTTTG TGGTGATTGG CAAAATCCTC
GGCGGACTTC GCGTCAGCAC AGAGCAGGAA GTGAATGGCC TAGATCTTTC CGAACACGAA
GAAACAGGCT ATAGCCTGTA G
|
|---|
| Protein sequence | MTQQTPALNT KIERSTNTQT SQHAKSAKPN AHYSKLGYQA LLALFASGFA GTALADEAQL
SGANTAWILS SSALVLLMTL PGLALFYGGL VRSKNVLSIL MQCFSIAAIA SVLWFVVGYS
IAFDTGNGFI GGLGKAFLAS IGRDSVSGDI PEPLFMLFQM TFAIITPALI IGGFAERMRF
SAVLMFSSAW LLLVYAPITH WVWGGGWLAE LGLYDFAGGT VVHITAGVAA LVAAKVLGPR
KGFLNSAIMP HNLTMTVTGA GMLWVGWFGF NGGSALGANG TAAMAILATH LAASMGAITW
AGIEWYKFGK ASALGIVTGM VAGLGTITPA SGYVGPAGAL VIGFLGGVVC FFSTVYIKQK
LKIDDSLDVF PVHGVGGILG TLLAGVFSST QLGIFSGYGF ASVNHTMLDQ LGAQAIGVIA
TFTYTAIVTW LLFVVIGKIL GGLRVSTEQE VNGLDLSEHE ETGYSL
|
|---|
| |