Gene Shewmr7_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0700 
Symbol 
ID4256877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp821166 
End bp821933 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content40% 
IMG OID638121311 
Productbacteriophage CI repressor 
Protein accessionYP_736757 
Protein GI114046207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000290373 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTTGAGTG TTCGAGTAGT TGGCGCTACT CGGTGGAAAT TTCAAAGTCG AGACATAATT 
GATCAAATGA AAAATCTTGT CAATATTAAA AATACTCAAT TCAGAATTCC TTTGAATTCT
ATACCTGAGT ACGACGGCGG TGAAACGGTG ATATTGCGAC TGTTATCGCT CTTTGGTGTA
AGGCATAGAC TTGAGTTAGG AGATCTTCTT TCTGTTAGCT CTGGTACATT TGCGACATGG
AAAACCCGCA ATACAACACC ATTTGAATTG CTCATTAGAA TTCACTTAGC GACTGGTGTG
CCTATGGAAT ATCTATGCTT TGGGCATGAA GGTGAGTCAG TTGATTTGAT GAAATATGGT
GTTTCAACAA AGACTGAATA TATAGATGGT CAGGTGATCG GTGTGCAGGA ACGCTTAGCC
AGTTATCGCC TCCCTTCACT TAAAATTTTT TCAATTGAAA ACGGAAACCT TAAACCTTCG
TCTGAAGTTT GTACCGATAA GGCATTTTTG CAGCTTGTTG GTGTAACTGG TGATGATTCA
GATTTGATTG TGAAAGATGC TGGGCATTTG CTTTTTATCA ACTCAAATGA AACTACCGTG
TCCAATGGTC AGTACCTTTT TACGATTAAT GGCATTTACC AGTTGGGTAA TTTAGGCATG
CTTCCCGACG GCAATGTTTA CCTTTTCCGT GAAGGTGATA AGTATCAAGT AAACCCAAAC
ACCACCAAGA TCCACGGCAA GGTTGTGAGT GTTTTAGAAA CTGTTTAA
 
Protein sequence
MLSVRVVGAT RWKFQSRDII DQMKNLVNIK NTQFRIPLNS IPEYDGGETV ILRLLSLFGV 
RHRLELGDLL SVSSGTFATW KTRNTTPFEL LIRIHLATGV PMEYLCFGHE GESVDLMKYG
VSTKTEYIDG QVIGVQERLA SYRLPSLKIF SIENGNLKPS SEVCTDKAFL QLVGVTGDDS
DLIVKDAGHL LFINSNETTV SNGQYLFTIN GIYQLGNLGM LPDGNVYLFR EGDKYQVNPN
TTKIHGKVVS VLETV